ZFIN is now using GRCz12tu for Genomic Data
Gene
mespba
- ID
- ZDB-GENE-000406-9
- Name
- mesoderm posterior ba
- Symbol
- mespba Nomenclature History
- Previous Names
-
- mesp-b
- mespb
- Type
- protein_coding_gene
- Location
- Chr: 7 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within several processes, including blood vessel endothelial cell fate specification; regionalization; and response to retinoic acid. Predicted to be active in nucleus. Is expressed in paraxial mesoderm; presumptive paraxial mesoderm; somite; and telencephalon. Human ortholog(s) of this gene implicated in myocardial infarction. Orthologous to human MESP1 (mesoderm posterior bHLH transcription factor 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 57 figures from 38 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 1 Figure from Deshwar et al., 2016
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Helix-loop-helix DNA-binding domain superfamily | Mesogenin/MesP | Myc-type, basic helix-loop-helix (bHLH) domain |
|---|---|---|---|---|---|
| UniProtKB:Q9IB69 | InterPro | 236 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
mespba-201
(1)
|
Ensembl | 851 nt | ||
| mRNA |
mespba-202
(1)
|
Ensembl | 1,032 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers