ZFIN is now using GRCz12tu for Genomic Data
Gene
csnk1a1
- ID
- ZDB-GENE-020419-19
- Name
- casein kinase 1, alpha 1
- Symbol
- csnk1a1 Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 14 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Enables protein serine/threonine kinase activity. Acts upstream of or within heart development and peptidyl-serine phosphorylation. Located in cytoplasm and nucleus. Is expressed in several structures, including brain; head; otic vesicle; pectoral fin; and solid lens vesicle. Orthologous to several human genes including CSNK1A1 (casein kinase 1 alpha 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 4 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
Wild Type Expression Summary
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Active_site | IPR008271 | Serine/threonine-protein kinase, active site |
| Binding_site | IPR017441 | Protein kinase, ATP binding site |
| Domain | IPR000719 | Protein kinase domain |
| Family | IPR050235 | Casein Kinase 1 Ser/Thr Protein Kinase |
| Homologous_superfamily | IPR011009 | Protein kinase-like domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Casein Kinase 1 Ser/Thr Protein Kinase | Protein kinase, ATP binding site | Protein kinase domain | Protein kinase-like domain superfamily | Serine/threonine-protein kinase, active site |
|---|---|---|---|---|---|---|---|
| UniProtKB:Q8JHE0 | InterPro | 365 | |||||
| UniProtKB:Q8JHD9 | InterPro | 353 | |||||
| UniProtKB:Q8JG73 | InterPro | 337 | |||||
| UniProtKB:Q8JGT0 | InterPro | 325 | |||||
| UniProtKB:A0A2R8Q421 | InterPro | 364 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| aberrant processed transcript |
csnk1a1-205
(1)
|
Ensembl | 876 nt | ||
| mRNA |
csnk1a1-201
(1)
|
Ensembl | 2,471 nt | ||
| mRNA |
csnk1a1-202
(1)
|
Ensembl | 2,341 nt | ||
| mRNA |
csnk1a1-203
(1)
|
Ensembl | 2,267 nt | ||
| mRNA |
csnk1a1-206
(1)
|
Ensembl | 2,340 nt | ||
| ncRNA |
csnk1a1-006
(1)
|
Ensembl | 734 nt | ||
| ncRNA |
csnk1a1-007
(1)
|
Ensembl | 783 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers