ZFIN is now using GRCz12tu for Genomic Data
Gene
nxf1b
- ID
- ZDB-GENE-030131-2585
- Name
- nuclear RNA export factor 1b
- Symbol
- nxf1b Nomenclature History
- Previous Names
-
- nxf1
- im:7156527
- wu:fc12d06
- Type
- protein_coding_gene
- Location
- Chr: 21 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable RNA binding activity. Predicted to be involved in poly(A)+ mRNA export from nucleus. Predicted to be active in nucleus. Orthologous to human NXF1 (nuclear RNA export factor 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7156527 (1 image)
Wild Type Expression Summary
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR002075 | Nuclear transport factor 2 domain |
| Domain | IPR005637 | TAP C-terminal (TAP-C) domain |
| Domain | IPR015245 | Nuclear RNA export factor Tap, RNA-binding domain |
| Domain | IPR018222 | Nuclear transport factor 2, eukaryote |
| Domain | IPR057125 | NXF1/2/3/5-like, leucine-rich repeat domain |
| Family | IPR030217 | Nuclear RNA export factor |
| Homologous_superfamily | IPR009060 | UBA-like superfamily |
| Homologous_superfamily | IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| Homologous_superfamily | IPR032675 | Leucine-rich repeat domain superfamily |
| Homologous_superfamily | IPR032710 | NTF2-like domain superfamily |
| Homologous_superfamily | IPR035979 | RNA-binding domain superfamily |
| Repeat | IPR001611 | Leucine-rich repeat |
Domain Details Per Protein
| Protein | Additional Resources | Length | Leucine-rich repeat | Leucine-rich repeat domain superfamily | NTF2-like domain superfamily | Nuclear RNA export factor | Nuclear RNA export factor Tap, RNA-binding domain | Nuclear transport factor 2 domain | Nuclear transport factor 2, eukaryote | Nucleotide-binding alpha-beta plait domain superfamily | NXF1/2/3/5-like, leucine-rich repeat domain | RNA-binding domain superfamily | TAP C-terminal (TAP-C) domain | UBA-like superfamily |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:F1Q7H6 | InterPro | 642 | ||||||||||||
| UniProtKB:A0ACD6B623 | InterPro | 645 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers