ZFIN is now using GRCz12tu for Genomic Data
Gene
usp16
- ID
- ZDB-GENE-030131-4153
- Name
- ubiquitin specific peptidase 16
- Symbol
- usp16 Nomenclature History
- Previous Names
-
- wu:fc76b02
- wu:fc76b08
- Type
- protein_coding_gene
- Location
- Chr: 15 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable several functions, including peptidase activity; transcription coactivator activity; and zinc ion binding activity. Predicted to be involved in DNA damage response; positive regulation of macromolecule biosynthetic process; and protein homotetramerization. Predicted to act upstream of or within several processes, including cell division; protein deubiquitination; and proteolysis. Predicted to be located in nucleus. Orthologous to human USP16 (ubiquitin specific peptidase 16).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7160401 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR018200 | Ubiquitin specific protease, conserved site |
| Domain | IPR001394 | Peptidase C19, ubiquitin carboxyl-terminal hydrolase |
| Domain | IPR001607 | Zinc finger, UBP-type |
| Domain | IPR028889 | Ubiquitin specific protease UPS, catalytic domain |
| Family | IPR030849 | Ubiquitin carboxyl-terminal hydrolase 16 |
| Family | IPR050164 | Ubiquitin carboxyl-terminal hydrolases |
| Homologous_superfamily | IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| Homologous_superfamily | IPR038765 | Papain-like cysteine peptidase superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Papain-like cysteine peptidase superfamily | Peptidase C19, ubiquitin carboxyl-terminal hydrolase | Ubiquitin carboxyl-terminal hydrolase 16 | Ubiquitin carboxyl-terminal hydrolases | Ubiquitin specific protease, conserved site | Ubiquitin specific protease UPS, catalytic domain | Zinc finger, RING/FYVE/PHD-type | Zinc finger, UBP-type |
|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A8HAL1 | InterPro | |||||||||
| UniProtKB:A0A8M3AQ52 | InterPro | 814 | ||||||||
| UniProtKB:A0A8M9QHB9 | InterPro | 741 | ||||||||
| UniProtKB:A0A8M9QC36 | InterPro | 815 | ||||||||
| UniProtKB:A0AC58HBD7 | InterPro | 741 | ||||||||
| UniProtKB:A0AC58HBD9 | InterPro | 740 | ||||||||
| UniProtKB:A0AC58HBE0 | InterPro | 740 | ||||||||
| UniProtKB:A0AC58HBE1 | InterPro | 741 | ||||||||
| UniProtKB:A0AC58HBE3 | InterPro | 814 | ||||||||
| UniProtKB:A0AC58HBE5 | InterPro | 814 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers