cops4

ID

ZDB-GENE-030131-4317

Name

COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)

Symbol

cops4 Nomenclature History

Previous Names

fc90c08
wu:fc90c08
zgc:77137

Type

protein_coding_gene

Location

Chr: 10 Mapping Details/Browsers

Genome Assembly

GRCz12tu

Annotation Status

Current

Description

Predicted to be located in cytoplasmic vesicle and nucleus. Predicted to be part of COP9 signalosome. Predicted to be active in synaptic vesicle. Is expressed in liver. Orthologous to human COPS4 (COP9 signalosome subunit 4).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

7 figures from 2 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:77137 (6 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With cops4 Human Ortholog

No data available

Associated With cops4 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000717	Proteasome component (PCI) domain
Domain	IPR041406	COP9 signalosome complex subunit 4, helix turn helix domain
Domain	IPR054559	PSMD12/CSN4-like, N-terminal
Family	IPR040134	26S Proteasome non-ATPase regulatory subunit 12/COP9 signalosome complex subunit 4
Homologous_superfamily	IPR011990	Tetratricopeptide-like helical domain superfamily
Homologous_superfamily	IPR036388	Winged helix-like DNA-binding domain superfamily
Homologous_superfamily	IPR036390	Winged helix DNA-binding domain superfamily