ZFIN is now using GRCz12tu for Genomic Data
Gene
hmg20a
- ID
- ZDB-GENE-030131-5107
- Name
- high mobility group 20A
- Symbol
- hmg20a Nomenclature History
- Previous Names
-
- fe47h11
- wu:fe47h11
- zgc:162335
- Type
- protein_coding_gene
- Location
- Chr: 25 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to be involved in regulation of gene expression. Predicted to be active in nucleus. Is expressed in telencephalon. Orthologous to human HMG20A (high mobility group 20A).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Chromatin Regulation and Neuronal Gene Expression | High mobility group box domain | High mobility group box domain superfamily |
|---|---|---|---|---|---|
| UniProtKB:A3KNQ1 | InterPro | 291 | |||
| UniProtKB:A0A8M2BLH9 | InterPro | 290 | |||
| UniProtKB:A0AC58IUJ3 | InterPro | 291 | |||
| UniProtKB:A0AC58IUJ8 | InterPro | 290 | |||
| UniProtKB:A0AC58IUJ9 | InterPro | 291 | |||
| UniProtKB:A0AC58IUK1 | InterPro | 290 | |||
| UniProtKB:A0AC58IUK2 | InterPro | 290 | |||
| UniProtKB:A0AC58IUK4 | InterPro | 291 | |||
| UniProtKB:A0AC58IUK5 | InterPro | 291 | |||
| UniProtKB:A0AB32TC33 | InterPro | 291 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
hmg20a-201
(1)
|
Ensembl | 1,478 nt | ||
| mRNA |
hmg20a-202
(1)
|
Ensembl | 836 nt | ||
| mRNA |
hmg20a-203
(1)
|
Ensembl | 1,079 nt | ||
| mRNA |
hmg20a-204
(1)
|
Ensembl | 1,271 nt | ||
| mRNA |
hmg20a-205
(1)
|
Ensembl | 1,107 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers