ZFIN is now using GRCz12tu for Genomic Data
Gene
myo1ea
- ID
- ZDB-GENE-030131-5127
- Name
- myosin IEa
- Symbol
- myo1ea Nomenclature History
- Previous Names
-
- myo1e1 (1)
- myo1e
- wu:fc15g04
- wu:fe49h01
- Type
- protein_coding_gene
- Location
- Chr: 7 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable actin filament binding activity and microfilament motor activity. Predicted to be involved in actin filament organization; endocytosis; and glomerulus development. Predicted to be active in several cellular components, including actin cytoskeleton; microvillus; and plasma membrane. Is expressed in somite 2 and somite 3. Human ortholog(s) of this gene implicated in focal segmental glomerulosclerosis 6. Orthologous to human MYO1E (myosin IE).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Sittaramane et al., 2008
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| focal segmental glomerulosclerosis 6 | Alliance | Glomerulosclerosis, focal segmental, 6 | 614131 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR001452 | SH3 domain |
| Domain | IPR001609 | Myosin head, motor domain-like |
| Domain | IPR010926 | Class I myosin tail homology domain |
| Domain | IPR035507 | Unconventional myosin-Ie/If, SH3 domain |
| Domain | IPR036072 | Class I myosin, motor domain |
| Homologous_superfamily | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| Homologous_superfamily | IPR036028 | SH3-like domain superfamily |
| Homologous_superfamily | IPR036961 | Kinesin motor domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Class I myosin, motor domain | Class I myosin tail homology domain | Kinesin motor domain superfamily | Myosin head, motor domain-like | P-loop containing nucleoside triphosphate hydrolase | SH3 domain | SH3-like domain superfamily | Unconventional myosin-Ie/If, SH3 domain |
|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8N7TD18 | InterPro | 1106 | ||||||||
| UniProtKB:A0A8M2BG81 | InterPro | 1116 | ||||||||
| UniProtKB:E7FDV0 | InterPro | 1117 | ||||||||
| UniProtKB:A0ACD6B5T7 | InterPro | 1117 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
myo1ea-201
(1)
|
Ensembl | 4,565 nt | ||
| mRNA |
myo1ea-202
(1)
|
Ensembl | 817 nt | ||
| mRNA |
myo1ea-204
(1)
|
Ensembl | 2,946 nt | ||
| mRNA |
myo1ea-205
(1)
|
Ensembl | 623 nt | ||
| ncRNA |
myo1ea-002
(1)
|
Ensembl | 612 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers