ZFIN is now using GRCz12tu for Genomic Data
Gene
phf6
- ID
- ZDB-GENE-030131-5278
- Name
- PHD finger protein 6
- Symbol
- phf6 Nomenclature History
- Previous Names
-
- wu:fa22g03
- zgc:55403
- Type
- protein_coding_gene
- Location
- Chr: 14 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable histone binding activity and histone deacetylase binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in brain; eye; liver; pleuroperitoneal region; and thymus. Used to study T-cell acute lymphoblastic leukemia. Human ortholog(s) of this gene implicated in Borjeson-Forssman-Lehmann syndrome; acute myeloid leukemia; and congestive heart failure. Orthologous to human PHF6 (PHD finger protein 6).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 5 figures from 3 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
Wild Type Expression Summary
- All Phenotype Data
- 2 figures from Loontiens et al., 2020
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Borjeson-Forssman-Lehmann syndrome | Alliance | Borjeson-Forssman-Lehmann syndrome | 301900 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Extended PHD (ePHD) domain | PHD-type Zinc Finger Domain-Containing Protein | Zinc finger, FYVE/PHD-type | Zinc finger, PHD-type | Zinc finger, RING/FYVE/PHD-type |
|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M9QKI0 | InterPro | 376 | |||||
| UniProtKB:Q803W6 | InterPro | 363 | |||||
| UniProtKB:A0AB32T5D9 | InterPro | 363 | |||||
| UniProtKB:A0AC58H5P0 | InterPro | 363 | |||||
| UniProtKB:A0AC58H5P3 | InterPro | 376 | |||||
| UniProtKB:A0AC58H5P6 | InterPro | 376 | |||||
| UniProtKB:A0AC58H5P8 | InterPro | 376 | |||||
| UniProtKB:A0AC58H5P9 | InterPro | 376 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers