ZFIN is now using GRCz12tu for Genomic Data
Gene
rpl23a
- ID
- ZDB-GENE-030131-7479
- Name
- ribosomal protein L23a
- Symbol
- rpl23a Nomenclature History
- Previous Names
-
- wu:fa93f05
- wu:fj20e05
- zgc:110139
- Type
- protein_coding_gene
- Location
- Chr: 21 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to be a structural constituent of ribosome. Acts upstream of or within pancreas development and regulation of cell cycle. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Is expressed in digestive system; endodermal cell; and epithelial cell of pancreas. Orthologous to human RPL23A (ribosomal protein L23a).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR001014 | Large ribosomal subunit protein uL23, conserved site |
| Domain | IPR005633 | Large ribosomal subunit protein uL23, N-terminal |
| Family | IPR013025 | Large ribosomal subunit protein uL23-like |
| Family | IPR019985 | Large ribosomal subunit protein uL23 |
| Homologous_superfamily | IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| Homologous_superfamily | IPR012678 | Ribosomal protein uL23/eL15/eS24 core domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Large ribosomal subunit protein uL23 | Large ribosomal subunit protein uL23, conserved site | Large ribosomal subunit protein uL23-like | Large ribosomal subunit protein uL23, N-terminal | Nucleotide-binding alpha-beta plait domain superfamily | Ribosomal protein uL23/eL15/eS24 core domain superfamily |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:Q6Q416 | InterPro | 155 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
rpl23a-201
(1)
|
Ensembl | 563 nt | ||
| mRNA |
rpl23a-204
(1)
|
Ensembl | 709 nt | ||
| mRNA |
rpl23a-205
(1)
|
Ensembl | 483 nt | ||
| ncRNA |
rpl23a-002
(1)
|
Ensembl | 551 nt | ||
| ncRNA |
rpl23a-003
(1)
|
Ensembl | 869 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers