Gene

rpl38

ID

ZDB-GENE-030131-8752

Name

ribosomal protein L38

Symbol

rpl38 Nomenclature History

Previous Names

si:dkey-1f1.2
wu:fb06b10
zgc:92860

Type

protein_coding_gene

Location

Chr: 12 Mapping Details/Browsers

Description

Predicted to be a structural constituent of ribosome. Acts upstream of or within chordate embryonic development. Predicted to be part of cytosolic large ribosomal subunit. Orthologous to human RPL38 (ribosomal protein L38).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

2 figures from 2 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:92860 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: 2 figures from Uechi et al., 2006
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With rpl38 Human Ortholog

No data available

Associated With rpl38 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR002675	Large ribosomal subunit protein eL38
Homologous_superfamily	IPR038464	Large ribosomal subunit protein eL38 superfamily

Domain Details Per Protein

Protein	Additional Resources	Length	Large ribosomal subunit protein eL38	Large ribosomal subunit protein eL38 superfamily
UniProtKB:Q6DGL9	InterPro PDB	70

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	rpl38-201 (1) Ensembl	Ensembl		879 nt	Select Tool ZFIN BLAST
mRNA	rpl38-202 (1) Ensembl	Ensembl		490 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations