Gene

lnx1

ID

ZDB-GENE-030131-9439

Name

ligand of numb-protein X 1

Symbol

lnx1 Nomenclature History

Previous Names

lnx
fj78f06
si:dkey-12h2.1
wu:fj78f06
zgc:152906

Type

protein_coding_gene

Location

Chr: 20 Mapping Details/Browsers

Description

Predicted to enable ubiquitin-protein transferase activity. Predicted to be involved in ubiquitin-dependent protein catabolic process. Predicted to be active in cytoplasm. Is expressed in central nervous system. Orthologous to human LNX1 (ligand of numb-protein X 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

2 figures from 2 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With lnx1 Human Ortholog

No data available

Associated With lnx1 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR017907	Zinc finger, RING-type, conserved site
Domain	IPR001478	PDZ domain
Domain	IPR001841	Zinc finger, RING-type
Family	IPR051342	PDZ domain-containing scaffold protein
Homologous_superfamily	IPR013083	Zinc finger, RING/FYVE/PHD-type
Homologous_superfamily	IPR036034	PDZ superfamily

Domain Details Per Protein

Protein	Additional Resources	Length
UniProtKB:A0A8M3AW57	InterPro	655
UniProtKB:A0A8M2B7D3	InterPro	657
UniProtKB:Q08CM8	InterPro	754
UniProtKB:A0A8M2B7C0	InterPro	767
UniProtKB:A0A8M2B7C4	InterPro	767
UniProtKB:A0A8M3AT53	InterPro	653
UniProtKB:A0A8M2B7L4	InterPro	769
UniProtKB:A0A8M1N9Q4	InterPro	765