ZFIN is now using GRCz12tu for Genomic Data
Gene

lmo7a

ID
ZDB-GENE-030219-74
Name
LIM domain 7a
Symbol
lmo7a Nomenclature History
Previous Names
  • lmo7 (1)
  • fc03h03
  • id:ibd5155 (1)
  • si:dkey-57a22.10 (1)
  • wu:fc03h03 (1)
Type
protein_coding_gene
Location
Chr: 9 Mapping Details/Browsers
Genome Assembly
GRCz12tu
Annotation Status
Current
Description
Predicted to be involved in positive regulation of macromolecule metabolic process and regulation of primary metabolic process. Is expressed in several structures, including brain; digestive system; eye; immature eye; and pericardial region. Orthologous to human LMO7 (LIM domain 7).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
4 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With lmo7a Human Ortholog
No data available
Associated With lmo7a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001478 PDZ domain
Domain IPR001715 Calponin homology domain
Domain IPR001781 Zinc finger, LIM-type
Domain IPR031865 Domain of unknown function DUF4757
Family IPR029978 LIM domain only protein 7
Homologous_superfamily IPR036034 PDZ superfamily
Homologous_superfamily IPR036872 CH domain superfamily
Domain Details Per Protein
Protein Additional Resources Length Calponin homology domain CH domain superfamily Domain of unknown function DUF4757 LIM domain only protein 7 PDZ domain PDZ superfamily Zinc finger, LIM-type
UniProtKB:A0A8M9QJM0 InterPro 1398
UniProtKB:A0A8M9PS20 InterPro 1661
UniProtKB:A0A8M9Q4J8 InterPro 1868
UniProtKB:A0A8M9PS15 InterPro 1874
UniProtKB:A0A8M9Q4K1 InterPro 1648
UniProtKB:A0A8M9QFD0 InterPro 1700
UniProtKB:A0A8M9QAP1 InterPro 1840
UniProtKB:B0UYM8 InterPro 1826
UniProtKB:A0A8M9QAP5 InterPro 1408
UniProtKB:A0A8M9QJL5 InterPro 1821
UniProtKB:A0A8M3B5K4 InterPro 1384
UniProtKB:A0A8M9QFC6 InterPro 1876
UniProtKB:A0A8M3B2L7 InterPro 1862
UniProtKB:A0A8M9QJL3 InterPro 1893
UniProtKB:A0A8M3AVY5 InterPro 1879
UniProtKB:A0AB32TX01 InterPro 1886
UniProtKB:A0AB32TXX3 InterPro 1880
UniProtKB:A0AB32TZW8 InterPro 1852
UniProtKB:A0AB32U0A2 InterPro 1420
UniProtKB:A0AB32U197 InterPro 1833
UniProtKB:A0AB32U1B3 InterPro 1905
UniProtKB:A0AB32U2G4 InterPro 1660
UniProtKB:A0AC58GE09 InterPro 1857
UniProtKB:A0AC58GE10 InterPro 1835
UniProtKB:A0AC58GE11 InterPro 1843
UniProtKB:A0AC58GE12 InterPro 1821
UniProtKB:A0AC58GE13 InterPro 1849
UniProtKB:A0AC58GE14 InterPro 1832
UniProtKB:A0AC58GE15 InterPro 1840
UniProtKB:A0AC58GE16 InterPro 1837
UniProtKB:A0AC58GE17 InterPro 1851
UniProtKB:A0AC58GE18 InterPro 1854
UniProtKB:A0AC58GE19 InterPro 1860
UniProtKB:A0AC58GE20 InterPro 1818
UniProtKB:A0AC58GE21 InterPro 1868
UniProtKB:A0AC58GE22 InterPro 1815
UniProtKB:A0AC58GE23 InterPro 1809
UniProtKB:A0AC58GE24 InterPro 1801
UniProtKB:A0AC58GE25 InterPro 1790
UniProtKB:A0AC58GE26 InterPro 1784
UniProtKB:A0AC58GE27 InterPro 1765
UniProtKB:A0AC58GE28 InterPro 1384
UniProtKB:A0AC58GE29 InterPro 1383
UniProtKB:A0AC58GE30 InterPro 1796
UniProtKB:A0AC58GE31 InterPro 1408
UniProtKB:A0AC58GE32 InterPro 1377
UniProtKB:A0AC58GE33 InterPro 1779
UniProtKB:A0AC58GE34 InterPro 1807
UniProtKB:A0AC58GE35 InterPro 1394
UniProtKB:A0AC58GE36 InterPro 1804
UniProtKB:A0AC58GE38 InterPro 1782
UniProtKB:A0AC58GE39 InterPro 1297
UniProtKB:A0AC58GE40 InterPro 1299
UniProtKB:A0AC58GE41 InterPro 1359
UniProtKB:A0AC58GE42 InterPro 1341
UniProtKB:A0AC58GE43 InterPro 1135
UniProtKB:A0AC58GE44 InterPro 1369
UniProtKB:A0AC58GE45 InterPro 1375
UniProtKB:A0AC58GE46 InterPro 1322
UniProtKB:A0AC58GE47 InterPro 1352
UniProtKB:A0AC58GE48 InterPro 1333
UniProtKB:A0AC58GE49 InterPro 1347
UniProtKB:A0AC58GE50 InterPro 1366
UniProtKB:A0AC58GE51 InterPro 1126
UniProtKB:A0AC58GE53 InterPro 1316
UniProtKB:A0AC58GE54 InterPro 1350
UniProtKB:A0AC58GE58 InterPro 1065
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
aberrant processed transcript lmo7a-203 (1)
Ensembl
Ensembl 625 nt
ZFIN BLAST
mRNA lmo7a-201 (1)
Ensembl
Ensembl 6,323 nt
ZFIN BLAST
mRNA lmo7a-202 (1)
Ensembl
Ensembl 812 nt
ZFIN BLAST
mRNA lmo7a-204 (1)
Ensembl
Ensembl 1,052 nt
ZFIN BLAST
mRNA lmo7a-210 (1)
Ensembl
Ensembl 663 nt
ZFIN BLAST
mRNA lmo7a-212 (1)
Ensembl
Ensembl 754 nt
ZFIN BLAST
ncRNA lmo7a-008 (1)
Ensembl
Ensembl 853 nt (2 sequences)
ncRNA lmo7a-206 (1)
Ensembl
Ensembl 824 nt
ZFIN BLAST
ncRNA lmo7a-207 (1)
Ensembl
Ensembl 733 nt
ZFIN BLAST
ncRNA lmo7a-208 (1)
Ensembl
Ensembl 895 nt
ZFIN BLAST
ncRNA lmo7a-209 (1)
Ensembl
Ensembl 853 nt
ZFIN BLAST
ncRNA lmo7a-211 (1)
Ensembl
Ensembl 914 nt
ZFIN BLAST
ncRNA lmo7a-213 (1)
Ensembl
Ensembl 962 nt
ZFIN BLAST
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Genome Browsers
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations
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