ZFIN is now using GRCz12tu for Genomic Data
Gene
slc3a2b
- ID
- ZDB-GENE-040122-2
- Name
- solute carrier family 3 member 2b
- Symbol
- slc3a2b Nomenclature History
- Previous Names
-
- id:ibd1327
- sb:cb519
- wu:fe14a07
- wu:fq18d12
- zgc:55813
- Type
- protein_coding_gene
- Location
- Chr: 21 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to be involved in L-alanine import across plasma membrane; L-leucine import across plasma membrane; and phenylalanine transport. Predicted to be active in apical plasma membrane and basolateral plasma membrane. Is expressed in several structures, including EVL; hatching gland; mesoderm; nervous system; and neural tube. Human ortholog(s) of this gene implicated in lung non-small cell carcinoma. Orthologous to human SLC3A2 (solute carrier family 3 member 2).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 20 figures from 4 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- cb519 (16 images)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR006047 | Glycosyl hydrolase family 13, catalytic domain |
| Domain | IPR031984 | Solute carrier family 3 member 2, N-terminal domain |
| Family | IPR042280 | Amino acid transporter heavy chain SLC3A2 |
| Homologous_superfamily | IPR013780 | Glycosyl hydrolase, all-beta |
| Homologous_superfamily | IPR017853 | Glycoside hydrolase superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Amino acid transporter heavy chain SLC3A2 | Glycoside hydrolase superfamily | Glycosyl hydrolase, all-beta | Glycosyl hydrolase family 13, catalytic domain | Solute carrier family 3 member 2, N-terminal domain |
|---|---|---|---|---|---|---|---|
| UniProtKB:Q6P3H9 | InterPro | 504 | |||||
| UniProtKB:A0ACD6B586 | InterPro | 504 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
slc3a2b-201
(1)
|
Ensembl | 2,195 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers