ZFIN is now using GRCz12tu for Genomic Data
Gene
zgc:91944
- ID
- ZDB-GENE-040718-417
- Name
- zgc:91944
- Symbol
- zgc:91944 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 19 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable double-stranded telomeric DNA binding activity. Predicted to act upstream of or within positive regulation of DNA-templated transcription. Predicted to be active in nucleus. Is expressed in lateral line ganglion and telencephalon.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 8 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:91944 (7 images)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR001356 | Homeodomain |
| Domain | IPR001387 | Cro/C1-type helix-turn-helix domain |
| Domain | IPR006899 | Hepatocyte nuclear factor 1, N-terminal |
| Domain | IPR044866 | HNF-1, dimerization domain |
| Domain | IPR044869 | HNF-1, POU-specific (POUs) atypical domain |
| Family | IPR040363 | Homeobox-containing protein 1 |
| Homologous_superfamily | IPR009057 | Homedomain-like superfamily |
| Homologous_superfamily | IPR010982 | Lambda repressor-like, DNA-binding domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Cro/C1-type helix-turn-helix domain | Hepatocyte nuclear factor 1, N-terminal | HNF-1, dimerization domain | HNF-1, POU-specific (POUs) atypical domain | Homedomain-like superfamily | Homeobox-containing protein 1 | Homeodomain | Lambda repressor-like, DNA-binding domain superfamily |
|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M3AKA5 | InterPro | 427 | ||||||||
| UniProtKB:Q6DG34 | InterPro | 469 | ||||||||
| UniProtKB:F1RAA7 | InterPro | 469 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
zgc:91944-201
(1)
|
Ensembl | 3,022 nt | ||
| mRNA |
zgc:91944-202
(1)
|
Ensembl | 3,127 nt | ||
| mRNA |
zgc:91944-203
(1)
|
Ensembl | 798 nt | ||
| mRNA |
zgc:91944-204
(1)
|
Ensembl | 2,962 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers