ZFIN is now using GRCz12tu for Genomic Data
Gene
pdcd7
- ID
- ZDB-GENE-040728-3
- Name
- programmed cell death 7
- Symbol
- pdcd7 Nomenclature History
- Previous Names
-
- zgc:111812
- Type
- protein_coding_gene
- Location
- Chr: 7 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable ubiquitin binding activity. Predicted to act upstream of or within ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway. Predicted to be part of U12-type spliceosomal complex. Orthologous to human PDCD7 (programmed cell death 7).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:111812 (1 image)
Wild Type Expression Summary
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR015940 | Ubiquitin-associated domain |
| Domain | IPR049467 | Ubiquitin-associated protein 1-like, UBA2 domain |
| Family | IPR031974 | Programmed cell death protein 7 |
| Family | IPR038870 | Ubiquitin-associated protein 1 |
| Family | IPR052831 | Apoptosis-promoting protein |
| Homologous_superfamily | IPR009060 | UBA-like superfamily |
| Homologous_superfamily | IPR042575 | Ubiquitin-associated protein 1, C-terminal |
Domain Details Per Protein
| Protein | Additional Resources | Length | Apoptosis-promoting protein | Programmed cell death protein 7 | UBA-like superfamily | Ubiquitin-associated domain | Ubiquitin-associated protein 1 | Ubiquitin-associated protein 1, C-terminal | Ubiquitin-associated protein 1-like, UBA2 domain |
|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:Q6DRL2 | InterPro | 508 | |||||||
| UniProtKB:A0A140LH17 | InterPro | 399 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers