ZFIN is now using GRCz12tu for Genomic Data
Gene
rpl18
- ID
- ZDB-GENE-040801-165
- Name
- ribosomal protein L18
- Symbol
- rpl18 Nomenclature History
- Previous Names
-
- fa98d03
- wu:fa98d03
- zgc:92872 (1)
- Type
- protein_coding_gene
- Location
- Chr: 16 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Acts upstream of or within erythrocyte maturation. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Is expressed in eye; head; intestine; liver; and pectoral fin bud. Used to study Diamond-Blackfan anemia. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 18. Orthologous to human RPL18 (ribosomal protein L18).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:6895524 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- 7 figures from Chen et al., 2020
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Diamond-Blackfan anemia 18 | Alliance | ?Diamond-Blackfan anemia 18 | 618310 |
| Human Disease | Fish | Conditions | Citations |
|---|---|---|---|
| Diamond-Blackfan anemia | rpl18zf3219/zf3219 (TU) | standard conditions | Chen et al., 2020 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Large ribosomal subunit protein eL18 | Large ribosomal subunit protein eL18, conserved site | Large ribosomal subunit protein uL15/eL18 | Large ribosomal subunit protein uL15/eL18 superfamily |
|---|---|---|---|---|---|---|
| UniProtKB:Q6DGL0 | InterPro PDB | 182 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers