ZFIN is now using GRCz12tu for Genomic Data
Gene
negr1
- ID
- ZDB-GENE-040822-27
- Name
- neuronal growth regulator 1
- Symbol
- negr1 Nomenclature History
- Previous Names
-
- zgc:100871
- Type
- protein_coding_gene
- Location
- Chr: 6 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Enables identical protein binding activity. Predicted to be involved in heterophilic cell-cell adhesion and regulation of synapse assembly. Predicted to act upstream of or within cell adhesion. Predicted to be located in side of membrane. Predicted to be active in plasma membrane. Is expressed in head; midbrain neural rod; nervous system; and otic vesicle. Orthologous to human NEGR1 (neuronal growth regulator 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 5 figures from 3 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7141308 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR003598 | Immunoglobulin subtype 2 |
| Domain | IPR003599 | Immunoglobulin domain subtype |
| Domain | IPR007110 | Immunoglobulin-like domain |
| Domain | IPR013098 | Immunoglobulin I-set |
| Domain | IPR013106 | Immunoglobulin V-set domain |
| Family | IPR050876 | IgLON domain-containing protein |
| Homologous_superfamily | IPR013783 | Immunoglobulin-like fold |
| Homologous_superfamily | IPR036179 | Immunoglobulin-like domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | IgLON domain-containing protein | Immunoglobulin domain subtype | Immunoglobulin I-set | Immunoglobulin-like domain | Immunoglobulin-like domain superfamily | Immunoglobulin-like fold | Immunoglobulin subtype 2 | Immunoglobulin V-set domain |
|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M3B3I9 | InterPro | 360 | ||||||||
| UniProtKB:A0A4W4 | InterPro | 346 | ||||||||
| UniProtKB:A0AC58JR20 | InterPro | 358 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers