ZFIN is now using GRCz12tu for Genomic Data
Gene
zgc:101715
- ID
- ZDB-GENE-040912-59
- Name
- zgc:101715
- Symbol
- zgc:101715 Nomenclature History
- Previous Names
-
- c19orf12b2 (1)
- Type
- protein_coding_gene
- Location
- Chr: 7 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Is expressed in central nervous system and somite. Human ortholog(s) of this gene implicated in hereditary spastic paraplegia 43 and neurodegeneration with brain iron accumulation 4. Orthologous to human C19orf12 (chromosome 19 open reading frame 12).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 4 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:101715 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| hereditary spastic paraplegia 43 | Alliance | ?Spastic paraplegia 43, autosomal recessive | 615043 |
| neurodegeneration with brain iron accumulation 4 | Alliance | Neurodegeneration with brain iron accumulation 4 | 614298 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Family | IPR033369 | Protein C19orf12 |
Domain Details Per Protein
| Protein | Additional Resources | Length | Protein C19orf12 |
|---|---|---|---|
| UniProtKB:Q66ID9 | InterPro | 141 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
zgc:101715-201
(1)
|
Ensembl | 942 nt | ||
| mRNA |
zgc:101715-202
(1)
|
Ensembl | 1,113 nt | ||
| ncRNA |
zgc:101715-002
(1)
|
Ensembl | 775 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers
- Comparative Orthology
- Alliance