ZFIN is now using GRCz12tu for Genomic Data
Gene

p4ha3

ID
ZDB-GENE-041010-4
Name
prolyl 4-hydroxylase, alpha polypeptide III
Symbol
p4ha3 Nomenclature History
Previous Names
  • si:dkey-260j18.3 (1)
  • WITHDRAWN: zgc:103728
  • zgc:103728
Type
protein_coding_gene
Location
Chr: 15 Mapping Details/Browsers
Genome Assembly
GRCz12tu
Annotation Status
Current
Description
Predicted to enable procollagen-proline 4-dioxygenase activity. Predicted to be involved in collagen fibril organization. Predicted to be located in endoplasmic reticulum lumen. Predicted to be active in endoplasmic reticulum. Is expressed in several structures, including alar plate midbrain region; liver; muscle; optic tectum; and yolk syncytial layer. Orthologous to human P4HA3 (prolyl 4-hydroxylase subunit alpha 3).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With p4ha3 Human Ortholog
No data available
Associated With p4ha3 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR005123 Oxoglutarate/iron-dependent dioxygenase domain
Domain IPR006620 Prolyl 4-hydroxylase, alpha subunit
Domain IPR044862 Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain
Domain IPR059068 Prolyl 4-hydroxylase, peptide-substrate-binding domain
Family IPR045054 Prolyl 4-hydroxylase
Homologous_superfamily IPR011990 Tetratricopeptide-like helical domain superfamily
Domain Details Per Protein
Protein Additional Resources Length Oxoglutarate/iron-dependent dioxygenase domain Prolyl 4-hydroxylase Prolyl 4-hydroxylase, alpha subunit Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain Prolyl 4-hydroxylase, peptide-substrate-binding domain Tetratricopeptide-like helical domain superfamily
UniProtKB:A0A8M9PC84 InterPro 592
UniProtKB:A0A8M9P742 InterPro 616
UniProtKB:A0A8N7T7S6 InterPro 538
UniProtKB:A0A8M9PLE4 InterPro 364
UniProtKB:A0A8M3ASK1 InterPro 402
UniProtKB:A0AB32T302 InterPro 544
UniProtKB:A0AB32T3M0 InterPro 496
UniProtKB:A0AC58HC03 InterPro 564
UniProtKB:A0AC58HC10 InterPro 577
UniProtKB:A0AC58HC13 InterPro 529
UniProtKB:A0AC58HC14 InterPro 627
UniProtKB:A0AC58HC16 InterPro 540
UniProtKB:A0AC58HC19 InterPro 532
UniProtKB:A0AC58HC21 InterPro 642
UniProtKB:A0AC58HC22 InterPro 523
UniProtKB:A0AC58HC24 InterPro 499
UniProtKB:A0AC58HC25 InterPro 496
UniProtKB:A0AC58HC26 InterPro 454
UniProtKB:A0AC58HC27 InterPro 520
UniProtKB:A0AC58HC28 InterPro 451
UniProtKB:A0AC58HC29 InterPro 478
UniProtKB:A0AC58HC32 InterPro 427
UniProtKB:A0AC58HC33 InterPro 514
UniProtKB:A0AC58HC34 InterPro 418
UniProtKB:A0AC58HC35 InterPro 364
UniProtKB:A0AC58HC36 InterPro 394
UniProtKB:A0AC58HC37 InterPro 383
UniProtKB:A0AC58HC38 InterPro 601
UniProtKB:A0AC58HC39 InterPro 394
UniProtKB:A0AC58HC40 InterPro 340
UniProtKB:A0AC58HC41 InterPro 418
UniProtKB:A0AC58HC42 InterPro 364
UniProtKB:A0AC58HC43 InterPro 364
UniProtKB:A0AC58HC44 InterPro 549
UniProtKB:A0AC58HC45 InterPro 262
UniProtKB:A0AC58HC46 InterPro 340
UniProtKB:A0AC58HC47 InterPro 556
UniProtKB:A0AC58HC48 InterPro 387
UniProtKB:A0AC58HC49 InterPro 402
UniProtKB:A0AC58HC50 InterPro 262
UniProtKB:A0AC58HC51 InterPro 330
UniProtKB:A0AC58HC53 InterPro 378
UniProtKB:A0AC58HC54 InterPro 466
UniProtKB:A0AC58HC61 InterPro 442
UniProtKB:A0AC58HC62 InterPro 444
UniProtKB:A0AC58HC69 InterPro 363
UniProtKB:A0AC58HC74 InterPro 286
UniProtKB:A0AC58HC78 InterPro 286
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA p4ha3-201 (1) Ensembl 1,737 nt
mRNA p4ha3-203 (1) Ensembl 2,964 nt
ncRNA p4ha3-002 (1) Ensembl 690 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Genome Browsers
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations