ZFIN is now using GRCz12tu for Genomic Data
Gene
snip1
- ID
- ZDB-GENE-041026-3
- Name
- Smad nuclear interacting protein
- Symbol
- snip1 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 16 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable mRNA binding activity. Acts upstream of or within mRNA splicing, via spliceosome. Predicted to be active in nucleus. Is expressed in several structures, including blastodisc; fourth ventricle; notochord; otic vesicle; and pectoral fin bud. Orthologous to human SNIP1 (Smad nuclear interacting protein 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 3 figures from 3 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:114106 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- 3 figures from Fernandez et al., 2018
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Neurodevelopmental disorder with hypotonia, craniofacial abnormalities, and seizures | 614501 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Cellular Process Regulator and RNA Processing Protein | Forkhead-associated (FHA) domain | SMAD/FHA domain superfamily |
|---|---|---|---|---|---|
| UniProtKB:Q4V8W8 | InterPro | 374 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers