ZFIN is now using GRCz12tu for Genomic Data
Gene
cspg4
- ID
- ZDB-GENE-050519-1
- Name
- chondroitin sulfate proteoglycan 4
- Symbol
- cspg4 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 25 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to be involved in nervous system development and signal transduction. Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in several structures, including head mesenchyme; inner ear; mesoderm; vasculature; and ventral mesenchyme. Human ortholog(s) of this gene implicated in relapsing-remitting multiple sclerosis. Orthologous to human CSPG4 (chondroitin sulfate proteoglycan 4).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 6 figures from Lee et al., 2020
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Concanavalin A-like lectin/glucanase domain superfamily | CSPG repeat | FRAS1-related extracellular matrix | Laminin G domain |
|---|---|---|---|---|---|---|
| UniProtKB:E7FCN9 | InterPro | 2305 | ||||
| UniProtKB:A0AC58IX25 | InterPro | 2305 | ||||
| UniProtKB:A0AC58IX27 | InterPro | 2305 | ||||
| UniProtKB:A0AC58IX28 | InterPro | 2222 | ||||
| UniProtKB:A0AC58IX33 | InterPro | 2222 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers