ZFIN is now using GRCz12tu for Genomic Data
Gene
sspo
- ID
- ZDB-GENE-051114-1
- Name
- SCO-spondin
- Symbol
- sspo Nomenclature History
- Previous Names
-
- scospondin
- subcommissural organ spondin (1)
- Type
- protein_coding_gene
- Location
- Chr: 24 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Involved in spinal cord anterior/posterior patterning. Predicted to be located in extracellular region. Is expressed in Reissner's fiber; flexural organ; floor plate; presumptive floor plate; and subcommissural organ. Used to study idiopathic scoliosis and scoliosis. Orthologous to human SSPOP (SCO-spondin, pseudogene).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 15 figures from 8 publications
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
No data available
Domain Details Per Protein
| Protein | Additional Resources | Length |
|---|---|---|
| UniProtKB:A0AB32TEF2 | InterPro | 5320 |
| UniProtKB:A0AC58ISS0 | InterPro | 5551 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
scospondin-201
(1)
|
Ensembl | 13,902 nt | ||
| mRNA |
scospondin-202
(1)
|
Ensembl | 3,029 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers