ZFIN is now using GRCz12tu for Genomic Data
Gene

casz1

ID
ZDB-GENE-060130-108
Name
castor zinc finger 1
Symbol
casz1 Nomenclature History
Previous Names
  • sb:eu580
  • wu:fk85f10
Type
protein_coding_gene
Location
Chr: 23 Mapping Details/Browsers
Genome Assembly
GRCz12tu
Annotation Status
Current
Description
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II and regulation of neuron differentiation. Predicted to act upstream of or within regulation of DNA-templated transcription. Predicted to be active in nucleus. Is expressed in several structures, including adaxial cell; cardiovascular system; hindbrain neural plate; musculature system; and nervous system. Orthologous to human CASZ1 (castor zinc finger 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
7 figures from Thisse et al., 2005
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With casz1 Human Ortholog
No data available
Associated With casz1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR013087 Zinc finger C2H2-type
Family IPR040373 Transcription factor castor
Domain Details Per Protein
Protein Additional Resources Length Transcription factor castor Zinc finger C2H2-type
UniProtKB:A0A8M2B961 InterPro 2001
UniProtKB:A0A8M9PFJ4 InterPro 2000
UniProtKB:A0A8M2B9I3 InterPro 2011
UniProtKB:A0A8M2B956 InterPro 2005
UniProtKB:A0A8M9PL89 InterPro 1910
UniProtKB:A0A8M3B6A1 InterPro 2022
UniProtKB:A0A8M9PWX4 InterPro 1231
UniProtKB:A0AB32TAW5 InterPro 1970
UniProtKB:A0AC58ILR0 InterPro 1989
UniProtKB:A0AC58ILR2 InterPro 1983
UniProtKB:A0AC58ILR4 InterPro 1979
UniProtKB:A0AC58ILR6 InterPro 1970
UniProtKB:A0AC58ILR7 InterPro 1970
UniProtKB:A0AC58ILS3 InterPro 1948
UniProtKB:A0AC58ILS4 InterPro 1948
UniProtKB:A0AC58ILS6 InterPro 1970
UniProtKB:A0AC58ILS9 InterPro 1893
UniProtKB:A0AC58ILT0 InterPro 1899
UniProtKB:A0AC58ILT1 InterPro 1948
UniProtKB:A0AC58ILT2 InterPro 1948
UniProtKB:A0AC58ILT4 InterPro 1948
UniProtKB:A0AC58ILT5 InterPro 1948
UniProtKB:A0AC58ILT6 InterPro 1970
UniProtKB:A0AC58ILT7 InterPro 1970
UniProtKB:A0AC58ILT9 InterPro 1858
UniProtKB:A0AC58ILU0 InterPro 1970
UniProtKB:A0AC58ILU1 InterPro 1858
UniProtKB:A0AC58ILU2 InterPro 1858
UniProtKB:A0AC58ILU3 InterPro 1858
UniProtKB:A0AC58ILU4 InterPro 1858
UniProtKB:A0AC58ILU6 InterPro 1858
UniProtKB:A0AC58ILU7 InterPro 1836
UniProtKB:A0AC58ILU8 InterPro 1889
UniProtKB:A0AC58ILU9 InterPro 1836
UniProtKB:A0AC58ILV0 InterPro 1858
UniProtKB:A0AC58ILV1 InterPro 1858
UniProtKB:A0AC58ILV3 InterPro 1970
UniProtKB:A0AC58ILV4 InterPro 1877
UniProtKB:A0AC58ILW3 InterPro 1836
UniProtKB:A0AC58ILW7 InterPro 1867
UniProtKB:A0AC58ILX3 InterPro 1836
UniProtKB:A0AC58ILX9 InterPro 1970
UniProtKB:A0AC58ILZ0 InterPro 1858
UniProtKB:A0AC58ILZ3 InterPro 1888
UniProtKB:A0AC58IM09 InterPro 1836
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA casz1-201 (1) Ensembl 4,701 nt
mRNA casz1-202 (1) Ensembl 4,933 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Genome Browsers
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations