ZFIN is now using GRCz12tu for Genomic Data
Gene
tmem237a
- ID
- ZDB-GENE-070402-3
- Name
- transmembrane protein 237a
- Symbol
- tmem237a Nomenclature History
- Previous Names
-
- als2cr4
- als2cr4a
- si:dkey-33m14.6
- Type
- protein_coding_gene
- Location
- Chr: 9 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Acts upstream of or within convergent extension involved in gastrulation. Predicted to be located in ciliary transition zone. Is expressed in nervous system; pectoral fin; pectoral fin bud; and pharyngeal arch 3-7. Human ortholog(s) of this gene implicated in Joubert syndrome and Joubert syndrome 14. Orthologous to human TMEM237 (transmembrane protein 237).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Joubert syndrome 14 | Alliance | Joubert syndrome 14 | 614424 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Family | IPR029409 | Transmembrane protein 237 |
Domain Details Per Protein
| Protein | Additional Resources | Length | Transmembrane protein 237 |
|---|---|---|---|
| UniProtKB:F1Q930 | InterPro | ||
| UniProtKB:A0A8M9QFF9 | InterPro | 382 | |
| UniProtKB:A0AB32TVE7 | InterPro | 415 | |
| UniProtKB:A0AB32TVX0 | InterPro | 420 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| aberrant processed transcript |
tmem237a-202
(1)
|
Ensembl | 1,291 nt | ||
| mRNA |
tmem237a-201
(1)
|
Ensembl | 1,398 nt | ||
| mRNA |
tmem237a-203
(1)
|
Ensembl | 872 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers