ZFIN is now using GRCz12tu for Genomic Data
Gene

ftr84

ID
ZDB-GENE-070705-530
Name
finTRIM family, member 84
Symbol
ftr84 Nomenclature History
Previous Names
  • ftr99
  • si:dkeyp-110c7.2 (1)
Type
protein_coding_gene
Location
Chr: 5 Mapping Details/Browsers
Genome Assembly
GRCz12tu
Annotation Status
Current
Description
Is expressed in several structures, including gill; heart; liver; muscle; and pleuroperitoneal region.
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from Luo et al., 2017
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With ftr84 Human Ortholog
No data available
Associated With ftr84 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000315 B-box-type zinc finger
Domain IPR001841 Zinc finger, RING-type
Domain IPR001870 B30.2/SPRY domain
Domain IPR003877 SPRY domain
Domain IPR003879 Butyrophylin-like, SPRY domain
Domain IPR006574 SPRY-associated
Domain IPR058030 TRIM8/14/16/25/29/45/65, coiled-coil region
Family IPR051051 E3 ubiquitin-protein ligase TRIM/RNF
Homologous_superfamily IPR013083 Zinc finger, RING/FYVE/PHD-type
Homologous_superfamily IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
Homologous_superfamily IPR043136 B30.2/SPRY domain superfamily
Domain Details Per Protein
Protein Additional Resources Length B30.2/SPRY domain B30.2/SPRY domain superfamily B-box-type zinc finger Butyrophylin-like, SPRY domain Concanavalin A-like lectin/glucanase domain superfamily E3 ubiquitin-protein ligase TRIM/RNF SPRY-associated SPRY domain TRIM8/14/16/25/29/45/65, coiled-coil region Zinc finger, RING/FYVE/PHD-type Zinc finger, RING-type
UniProtKB:A0AC58JL84 InterPro 407
UniProtKB:A0AC58JL87 InterPro 389
UniProtKB:A0AC58JLA4 InterPro 547
UniProtKB:A0ACD6B6D9 InterPro 565
UniProtKB:F1QXB4 InterPro 565
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA ftr99-201 (1) Ensembl 1,698 nt
mRNA ftr99-202 (1) Ensembl 645 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Genome Browsers
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations