ZFIN is now using GRCz12tu for Genomic Data
Gene
mmp25a
- ID
- ZDB-GENE-070820-22
- Name
- matrix metallopeptidase 25a
- Symbol
- mmp25a Nomenclature History
- Previous Names
-
- mmp25
- MMPLa (1)
- si:ch73-248e21.6
- Type
- protein_coding_gene
- Location
- Chr: 3 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable metalloendopeptidase activity. Predicted to be involved in collagen catabolic process and extracellular matrix organization. Predicted to act upstream of or within proteolysis. Predicted to be located in extracellular matrix and membrane. Predicted to be active in extracellular space. Orthologous to human MMP25 (matrix metallopeptidase 25).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Crawford et al., 2014
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000585 | Hemopexin-like domain |
| Domain | IPR001818 | Peptidase M10, metallopeptidase |
| Domain | IPR002477 | Peptidoglycan binding-like |
| Domain | IPR006026 | Peptidase, metallopeptidase |
| Domain | IPR008015 | GMP phosphodiesterase, delta subunit |
| Domain | IPR033739 | Peptidase M10A, catalytic domain |
| Family | IPR021190 | Peptidase M10A |
| Family | IPR051519 | PDE6D/unc-119 myristoyl-binding |
| Homologous_superfamily | IPR014756 | Immunoglobulin E-set |
| Homologous_superfamily | IPR024079 | Metallopeptidase, catalytic domain superfamily |
| Homologous_superfamily | IPR036365 | PGBD-like superfamily |
| Homologous_superfamily | IPR036375 | Hemopexin-like domain superfamily |
| Homologous_superfamily | IPR037036 | GMP phosphodiesterase, delta subunit superfamily |
| Repeat | IPR018487 | Hemopexin-like repeats |
Domain Details Per Protein
| Protein | Additional Resources | Length | GMP phosphodiesterase, delta subunit | GMP phosphodiesterase, delta subunit superfamily | Hemopexin-like domain | Hemopexin-like domain superfamily | Hemopexin-like repeats | Immunoglobulin E-set | Metallopeptidase, catalytic domain superfamily | PDE6D/unc-119 myristoyl-binding | Peptidase M10A | Peptidase M10A, catalytic domain | Peptidase M10, metallopeptidase | Peptidase, metallopeptidase | Peptidoglycan binding-like | PGBD-like superfamily |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M9PJH5 | InterPro | 514 | ||||||||||||||
| UniProtKB:A0A8M9PYF1 | InterPro | 514 | ||||||||||||||
| UniProtKB:A0A8M9PFG4 | InterPro | 488 | ||||||||||||||
| UniProtKB:A0A8M9PQG7 | InterPro | 488 | ||||||||||||||
| UniProtKB:A0A8M3AR02 | InterPro | 261 | ||||||||||||||
| UniProtKB:A0AC58J2H3 | InterPro | 492 | ||||||||||||||
| UniProtKB:A0AC58J2H6 | InterPro | 550 | ||||||||||||||
| UniProtKB:A0AC58J2H8 | InterPro | 542 | ||||||||||||||
| UniProtKB:A0AC58J2I2 | InterPro | 261 | ||||||||||||||
| UniProtKB:A0AC58J2I4 | InterPro | 518 | ||||||||||||||
| UniProtKB:A0AC58J2K0 | InterPro | 568 | ||||||||||||||
| UniProtKB:A0AB32TLQ2 | InterPro | 526 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
mmp25a-201
(1)
|
Ensembl | 1,737 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers