ZFIN is now using GRCz12tu for Genomic Data
Gene

si:dkey-181m9.8

ID
ZDB-GENE-070912-399
Name
si:dkey-181m9.8
Symbol
si:dkey-181m9.8 Nomenclature History
Previous Names
  • wu:fe36b10
Type
protein_coding_gene
Location
Chr: 2 Mapping Details/Browsers
Genome Assembly
GRCz12tu
Annotation Status
Current
Description
Predicted to enable linear polyubiquitin binding activity; polyubiquitin modification-dependent protein binding activity; and ubiquitin protein ligase activity. Predicted to be involved in protein linear polyubiquitination. Predicted to act upstream of or within protein modification process and protein transport. Predicted to be part of LUBAC complex.
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With si:dkey-181m9.8 Human Ortholog
No data available
Associated With si:dkey-181m9.8 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001841 Zinc finger, RING-type
Domain IPR002867 IBR domain
Domain IPR008883 Ubiquitin E2 variant, N-terminal
Domain IPR041031 RNF31, C-terminal
Domain IPR044066 TRIAD supradomain
Domain IPR047540 E3 ubiquitin-protein ligase RNF31-like, BRcat domain
Domain IPR047541 E3 ubiquitin-protein ligase RNF31-like, modified RING finger, HC subclass
Domain IPR047542 E3 ubiquitin-protein ligase RNF31-like, Rcat domain
Family IPR026254 E3 ubiquitin-protein ligase RNF31-like
Homologous_superfamily IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily IPR013083 Zinc finger, RING/FYVE/PHD-type
Homologous_superfamily IPR016135 Ubiquitin-conjugating enzyme/RWD-like
Homologous_superfamily IPR035979 RNA-binding domain superfamily
Domain Details Per Protein
Protein Additional Resources Length E3 ubiquitin-protein ligase RNF31-like E3 ubiquitin-protein ligase RNF31-like, BRcat domain E3 ubiquitin-protein ligase RNF31-like, modified RING finger, HC subclass E3 ubiquitin-protein ligase RNF31-like, Rcat domain IBR domain Nucleotide-binding alpha-beta plait domain superfamily RNA-binding domain superfamily RNF31, C-terminal TRIAD supradomain Ubiquitin-conjugating enzyme/RWD-like Ubiquitin E2 variant, N-terminal Zinc finger, RING/FYVE/PHD-type Zinc finger, RING-type
UniProtKB:A0A8N7T8A9 InterPro 867
UniProtKB:A0AB32T2M0 InterPro 871
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA si:dkey-181m9.8-202 (1)
Ensembl
Ensembl 1,985 nt
ZFIN BLAST
ncRNA si:dkey-181m9.8-002 (1)
Ensembl
Ensembl 368 nt
ZFIN BLAST
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Genome Browsers
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations
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