ZFIN is now using GRCz12tu for Genomic Data
Gene

qkib

ID
ZDB-GENE-081028-54
Name
QKI, KH domain containing, RNA binding b
Symbol
qkib Nomenclature History
Previous Names
  • si:ch73-47d4.1 (1)
Type
protein_coding_gene
Location
Chr: 13 Mapping Details/Browsers
Genome Assembly
GRCz12tu
Annotation Status
Current
Description
Is expressed in hindbrain neural rod; midbrain neural rod; nervous system; and somite. Orthologous to human QKI (QKI, KH domain containing RNA binding).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
4 figures from Radomska et al., 2016
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With qkib Human Ortholog
No data available
Associated With qkib Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR004087 K Homology domain
Domain IPR032377 STAR protein, homodimerisation region
Domain IPR055256 KHDC4/BBP-like, KH-domain type I
Family IPR045071 KH domain-containing BBP-like
Homologous_superfamily IPR036612 K Homology domain, type 1 superfamily
Domain Details Per Protein
Protein Additional Resources Length KHDC4/BBP-like, KH-domain type I KH domain-containing BBP-like K Homology domain K Homology domain, type 1 superfamily STAR protein, homodimerisation region
UniProtKB:A0AC58H3S3 InterPro 370
UniProtKB:A0AC58H3S5 InterPro 333
UniProtKB:A0AC58H3T1 InterPro 363
UniProtKB:A0AC58H3T2 InterPro 371
UniProtKB:A0AC58H3T6 InterPro 342
UniProtKB:A0AC58H3T8 InterPro 341
UniProtKB:A0AC58H3U3 InterPro 362
UniProtKB:A0AC58H3U4 InterPro 334
UniProtKB:A0AC58H3V3 InterPro 337
UniProtKB:A0A8M9QA18 InterPro 350
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA qki-204 (1) Ensembl 1,008 nt
mRNA qki-205 (1) Ensembl 990 nt
mRNA qki-206 (1) Ensembl 1,044 nt
mRNA qkib-202 (1) Ensembl 405 nt
mRNA qkib-204 (1) Ensembl 537 nt
ncRNA qkib-003 (1) Ensembl 535 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Genome Browsers
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations