Gene
synpo2lb
- ID
- ZDB-GENE-090828-5
- Name
- synaptopodin 2-like b
- Symbol
- synpo2lb Nomenclature History
- Previous Names
-
- chap1 (1)
- im:7159270
- Type
- protein_coding_gene
- Location
- Chr: 12 Mapping Details/Browsers
- Description
- Predicted to enable actin binding activity. Acts upstream of or within cardiac muscle tissue development and skeletal muscle tissue development. Predicted to be located in cytoskeleton. Predicted to be active in Z disc; actin cytoskeleton; and nucleus. Is expressed in adaxial cell; cardiovascular system; musculature system; pectoral fin bud; and somite. Orthologous to human SYNPO2L (synaptopodin 2 like).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 8 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7159270 (40 images)
Wild Type Expression Summary
- All Phenotype Data
- 4 figures from Beqqali et al., 2010
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | PDZ domain | PDZ superfamily | Synaptopodin domain-containing protein |
|---|---|---|---|---|---|
| UniProtKB:U3JAM7 | InterPro | 1184 | |||
| UniProtKB:A0A2R8RTS6 | InterPro | 879 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
synpo2lb-201
(1)
|
Ensembl | 6,314 nt | ||
| mRNA |
synpo2lb-202
(1)
|
Ensembl | 5,501 nt | ||
| mRNA |
synpo2lb-203
(1)
|
Ensembl | 5,969 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Comparative Orthology
- Alliance