ZFIN is now using GRCz12tu for Genomic Data
Gene
ppfia3
- ID
- ZDB-GENE-100311-3
- Name
- PTPRF interacting protein alpha 3
- Symbol
- ppfia3 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 3 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Acts upstream of or within vasculature development. Predicted to be located in cytoplasm. Predicted to be active in presynaptic active zone. Orthologous to human PPFIA3 (PTPRF interacting protein alpha 3).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 1 Figure from Mana et al., 2016
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Paul-Chao neurodevelopmental syndrome | 621122 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Liprin-alpha, CC2 domain | Sterile alpha motif domain | Sterile alpha motif/pointed domain superfamily |
|---|---|---|---|---|---|
| UniProtKB:X1WCJ5 | InterPro | 1226 | |||
| UniProtKB:A0A8M9Q8T7 | InterPro | 1206 | |||
| UniProtKB:A0AC58J2D1 | InterPro | 1206 | |||
| UniProtKB:A0AC58J2D5 | InterPro | 1226 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
ppfia3-201
(1)
|
Ensembl | 1,845 nt | ||
| mRNA |
ppfia3-202
(1)
|
Ensembl | 4,778 nt | ||
| mRNA |
ppfia3-203
(1)
|
Ensembl | 741 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers
- Comparative Orthology
- Alliance