ZFIN is now using GRCz12tu for Genomic Data
Gene
phf1
- ID
- ZDB-GENE-100922-277
- Name
- PHD finger protein 1
- Symbol
- phf1 Nomenclature History
- Previous Names
-
- mtf2l2 (1)
- si:ch73-119j17.3
- Type
- protein_coding_gene
- Location
- Chr: 16 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Is expressed in telencephalon. Orthologous to human PHF1 (PHD finger protein 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Diotel et al., 2015
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR019786 | Zinc finger, PHD-type, conserved site |
| Domain | IPR001965 | Zinc finger, PHD-type |
| Domain | IPR002999 | Tudor domain |
| Domain | IPR019787 | Zinc finger, PHD-finger |
| Domain | IPR025894 | Polycomb-like MTF2 factor 2, C-terminal domain |
| Domain | IPR040477 | Lysine-specific demethylase 4-like, Tudor domain |
| Domain | IPR047399 | PHD finger protein 1, Tudor domain |
| Homologous_superfamily | IPR011011 | Zinc finger, FYVE/PHD-type |
| Homologous_superfamily | IPR013083 | Zinc finger, RING/FYVE/PHD-type |
Domain Details Per Protein
| Protein | Additional Resources | Length | Lysine-specific demethylase 4-like, Tudor domain | PHD finger protein 1, Tudor domain | Polycomb-like MTF2 factor 2, C-terminal domain | Tudor domain | Zinc finger, FYVE/PHD-type | Zinc finger, PHD-finger | Zinc finger, PHD-type | Zinc finger, PHD-type, conserved site | Zinc finger, RING/FYVE/PHD-type |
|---|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M1RE33 | InterPro | 504 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers