ZFIN is now using GRCz12tu for Genomic Data
Gene
adgre5b.1
- ID
- ZDB-GENE-130116-3
- Name
- adhesion G protein-coupled receptor E5b, duplicate 1
- Symbol
- adgre5b.1 Nomenclature History
- Previous Names
-
- adgre5b
- cd97
- cd97b
- Type
- protein_coding_gene
- Location
- Chr: 1 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to act upstream of or within cell adhesion and cell surface receptor signaling pathway. Predicted to be located in extracellular region and membrane. Predicted to be active in plasma membrane. Is expressed in several structures, including eye; heart; integument; liver; and pleuroperitoneal region.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Harty et al., 2015
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR000203 | GPS motif |
| Conserved_site | IPR018097 | EGF-like calcium-binding, conserved site |
| Domain | IPR000742 | EGF-like domain |
| Domain | IPR001881 | EGF-like calcium-binding domain |
| Domain | IPR017981 | GPCR, family 2-like, 7TM |
| Domain | IPR057244 | GAIN, subdomain B |
| Family | IPR000832 | GPCR, family 2, secretin-like |
| Family | IPR003056 | GPCR, family 2, ADGRE2/ADGRE5 |
| Homologous_superfamily | IPR009030 | Growth factor receptor cysteine-rich domain superfamily |
| Homologous_superfamily | IPR046338 | GAIN domain superfamily |
| PTM | IPR000152 | EGF-type aspartate/asparagine hydroxylation site |
Domain Details Per Protein
| Protein | Additional Resources | Length | EGF-like calcium-binding, conserved site | EGF-like calcium-binding domain | EGF-like domain | EGF-type aspartate/asparagine hydroxylation site | GAIN domain superfamily | GAIN, subdomain B | GPCR, family 2, ADGRE2/ADGRE5 | GPCR, family 2-like, 7TM | GPCR, family 2, secretin-like | GPS motif | Growth factor receptor cysteine-rich domain superfamily |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M2BIB9 | InterPro | 761 | |||||||||||
| UniProtKB:A0AC58G4S9 | InterPro | 723 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
adgre5b.1-201
(1)
|
Ensembl | 2,151 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers
- Comparative Orthology
- Alliance