ZFIN is now using GRCz12tu for Genomic Data
Gene
ankfn1a
- ID
- ZDB-GENE-130603-21
- Name
- ankyrin repeat and fibronectin type III domain containing 1a
- Symbol
- ankfn1a Nomenclature History
- Previous Names
-
- ankfn1
- si:ch211-277e21.1
- si:ch211-277e21.2
- Type
- protein_coding_gene
- Location
- Chr: 12 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to be involved in establishment of mitotic spindle orientation and regulation of establishment of bipolar cell polarity. Predicted to be active in spindle. Orthologous to human ANKFN1 (ankyrin repeat and fibronectin type III domain containing 1).
- Genome Resources
- Note
-
The gene model in Ensembl is split into two Ensembl genes: ENSDARG00000096800 and ENSDARG00000060941.
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 1 Figure from Wang et al., 2022
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR003961 | Fibronectin type III |
| Family | IPR039269 | Ankyrin repeat and fibronectin type-III domain-containing protein 1 |
| Homologous_superfamily | IPR013783 | Immunoglobulin-like fold |
| Homologous_superfamily | IPR036116 | Fibronectin type III superfamily |
| Homologous_superfamily | IPR036770 | Ankyrin repeat-containing domain superfamily |
| Repeat | IPR002110 | Ankyrin repeat |
Domain Details Per Protein
| Protein | Additional Resources | Length | Ankyrin repeat | Ankyrin repeat and fibronectin type-III domain-containing protein 1 | Ankyrin repeat-containing domain superfamily | Fibronectin type III | Fibronectin type III superfamily | Immunoglobulin-like fold |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M3AYI6 | InterPro | 1312 | ||||||
| UniProtKB:A0A8M9PMH9 | InterPro | 1412 | ||||||
| UniProtKB:A0A9V2V100 | InterPro | 1418 | ||||||
| UniProtKB:A0AB32TJ98 | InterPro | 1061 | ||||||
| UniProtKB:A0AC58GY94 | InterPro | 1404 | ||||||
| UniProtKB:A0AC58GYA4 | InterPro | 1418 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
ankfn1-201
(1)
|
Ensembl | 3,178 nt | ||
| mRNA |
ankfn1-203
(1)
|
Ensembl | 3,162 nt | ||
| mRNA |
si:ch211-277e21.1-201
(1)
|
Ensembl | 609 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers