ZFIN is now using GRCz12tu for Genomic Data
Gene

cdh16

ID
ZDB-GENE-140106-140
Name
cadherin 16, KSP-cadherin
Symbol
cdh16 Nomenclature History
Previous Names
  • irbl (1)
  • zmp:0000001180 (1)
Type
protein_coding_gene
Location
Chr: 7 Mapping Details/Browsers
Genome Assembly
GRCz12tu
Annotation Status
Current
Description
Predicted to enable calcium ion binding activity. Predicted to act upstream of or within homophilic cell-cell adhesion. Predicted to be located in plasma membrane. Is expressed in corpuscles of Stannius. Orthologous to human CDH16 (cadherin 16).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
4 figures from 2 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With cdh16 Human Ortholog
No data available
Associated With cdh16 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
No data available
Domain Details Per Protein
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA cdh16-201 (1) Ensembl 4,829 nt
mRNA cdh16-202 (1) Ensembl 5,564 nt
mRNA cdh16-203 (1) Ensembl 4,935 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Genome Browsers
Orthology
Comparative Orthology
Alliance
Citations