ZFIN is now using GRCz12tu for Genomic Data
Gene
ncam1a
- ID
- ZDB-GENE-990415-31
- Name
- neural cell adhesion molecule 1a
- Symbol
- ncam1a Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 21 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Acts upstream of or within posterior commissure morphogenesis. Predicted to be located in plasma membrane. Is expressed in several structures, including anterior neural keel; myotome; nervous system; optic vesicle; and pectoral fin. Human ortholog(s) of this gene implicated in several diseases, including alcohol dependence; bipolar disorder; drug dependence; middle cerebral artery infarction; and nicotine dependence. Orthologous to human NCAM1 (neural cell adhesion molecule 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 27 figures from 12 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- cssl:d828 (14 images)
- eu303 (6 images)
Wild Type Expression Summary
- All Phenotype Data
- 2 figures from Langhauser et al., 2012
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR003598 | Immunoglobulin subtype 2 |
| Domain | IPR003599 | Immunoglobulin domain subtype |
| Domain | IPR003961 | Fibronectin type III |
| Domain | IPR007110 | Immunoglobulin-like domain |
| Domain | IPR013098 | Immunoglobulin I-set |
| Family | IPR009138 | Neural cell adhesion |
| Family | IPR050958 | Cell Adhesion and Cytoskeletal Organization |
| Family | IPR051170 | Neural and epithelial cell adhesion domain-containing protein |
| Homologous_superfamily | IPR013783 | Immunoglobulin-like fold |
| Homologous_superfamily | IPR036116 | Fibronectin type III superfamily |
| Homologous_superfamily | IPR036179 | Immunoglobulin-like domain superfamily |
Domain Details Per Protein
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
ncam1a-201
(1)
|
Ensembl | 2,921 nt | ||
| mRNA |
ncam1a-202
(1)
|
Ensembl | 878 nt | ||
| mRNA |
ncam1a-206
(1)
|
Ensembl | 2,810 nt | ||
| mRNA |
ncam1a-207
(1)
|
Ensembl | 2,840 nt | ||
| ncRNA |
ncam1a-002
(1)
|
Ensembl | 903 nt | ||
| ncRNA |
ncam1a-004
(1)
|
Ensembl | 665 nt | ||
| ncRNA |
ncam1a-005
(1)
|
Ensembl | 528 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers