ZFIN is now using GRCz12tu for Genomic Data
Gene
slc39a7
- ID
- ZDB-GENE-991110-20
- Name
- solute carrier family 39 member 7
- Symbol
- slc39a7 Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 19 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable zinc ion transmembrane transporter activity. Acts upstream of or within intracellular zinc ion homeostasis. Predicted to be located in Golgi apparatus; endoplasmic reticulum; and membrane. Predicted to be active in endoplasmic reticulum membrane. Is expressed in brain; eye; gill; muscle; and optic cup. Human ortholog(s) of this gene implicated in agammaglobulinemia 9. Orthologous to human SLC39A7 (solute carrier family 39 member 7).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 8 figures from 8 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7143734 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- 2 figures from Yan et al., 2012
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| agammaglobulinemia 9 | Alliance | Agammaglobulinemia 9, autosomal recessive | 619693 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Family | IPR003689 | Zinc/iron permease |
Domain Details Per Protein
| Protein | Additional Resources | Length | Zinc/iron permease |
|---|---|---|---|
| UniProtKB:Q6DGU8 | InterPro | 444 | |
| UniProtKB:Q9PUB8 | InterPro | 444 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
slc39a7-201
(1)
|
Ensembl | 914 nt | ||
| mRNA |
slc39a7-202
(1)
|
Ensembl | 1,983 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers