Transcript

nop56-004

ID

ZDB-TSCRIPT-090929-18666

Name

nop56-004 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

nop56 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000135696 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000135696.3|gene_biotype:protein_coding|ENSDARG00000012820.12 transcript_biotype:retained_intron cdna chromosome:GRCz11:21:11966716:11970187:-1
GAGTGATCCGAAGAAACGCAACGCTCCTCGTGCGCGGAGC
ACGAGATCGGCAAACATGGTGCTTTTACACGTGTTGTTCG
AGCATGCGGCTGGATATGCGTTGTTGGCTGTTAAAGAAGT
GGAGGAGATTGGCATGCTTCTACCTCAGGTGGAGGAAAGT
GTCCTAAATGTTGGAAAGTTCAGCAGCGTGGTCAAACTGA
GTGCGTTCTTTCCCTTTAAATCCGCCCAGGGTGCATTGGA
AAACATCAATGCAGTTTCTGAAGGAGTTGTCCATGCAGAT
CTTAAGCTTTTTTTGGAGACCAACCTTCCGTCCGGAGGTA
AAAAGAAGCCCATGTTGGGGGTGTCCGATGCTAAGCTTGG
AGCAGCACTTCAGGAAGAACTCAATCTGTCCATTCAGACT
GGAGGTGTGGTAGCTGAAATCATAAGAGGTGTACGTCTGC
ACTTTCATTCACTGGTCAAGGGTCTCACGGCTCAAGCAGC
GTCTAAAGCTCAGTTGGGTTTGGGTCACAGCTATTCCAGA
GCCAAAGTGAAGTTCAATGTCAACAGGGCAGACAACATGA
TCATCCAGTCCATCGCCCTCCTGGACCAGCTGGACAAAGA
CATCAACACCTTCTCCATGCGCGTGCGGTAAGAGGCTTTT
AACTAGGATTTCAAGAGTCCGTTATGTAATGGTTTCCACT
AGGGCTGCACGATATTGGTAAAATCTGAAATTGCAATATT
TATTCACAAGGTGGTTTGAACAGCACTATTTGATGGGTTT
TCTGGGCAGTAATAAGCTACAGAAATGAAGTAAT

OTTDART00000038276 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000038276|OTTDARG00000028183|ZDB-GENE-040109-1 nop56|no_translation nol5a-004 LG_ CT027620.13 Danio rerio protein_coding KNOWN, 794 bp
GAGTGATCCGAAGAAACGCAACGCTCCTCGTGCGCGGAGC
ACGAGATCGGCAAACATGGTGCTTTTACACGTGTTGTTCG
AGCATGCGGCTGGATATGCGTTGTTGGCTGTTAAAGAAGT
GGAGGAGATTGGCATGCTTCTACCTCAGGTGGAGGAAAGT
GTCCTAAATGTTGGAAAGTTCAGCAGCGTGGTCAAACTGA
GTGCGTTCTTTCCCTTTAAATCCGCCCAGGGTGCATTGGA
AAACATCAATGCAGTTTCTGAAGGAGTTGTCCATGCAGAT
CTTAAGCTTTTTTTGGAGACCAACCTTCCGTCCGGAGGTA
AAAAGAAGCCCATGTTGGGGGTGTCCGATGCTAAGCTTGG
AGCAGCACTTCAGGAAGAACTCAATCTGTCCATTCAGACT
GGAGGTGTGGTAGCTGAAATCATAAGAGGTGTACGTCTGC
ACTTTCATTCACTGGTCAAGGGTCTCACGGCTCAAGCAGC
GTCTAAAGCTCAGTTGGGTTTGGGTCACAGCTATTCCAGA
GCCAAAGTGAAGTTCAATGTCAACAGGGCAGACAACATGA
TCATCCAGTCCATCGCCCTCCTGGACCAGCTGGACAAAGA
CATCAACACCTTCTCCATGCGCGTGCGGTAAGAGGCTTTT
AACTAGGATTTCAAGAGTCCGTTATGTAATGGTTTCCACT
AGGGCTGCACGATATTGGTAAAATCTGAAATTGCAATATT
TATTCACAAGGTGGTTTGAACAGCACTATTTGATGGGTTT
TCTGGGCAGTAATAAGCTACAGAAATGAAGTAAT

Related Transcripts

Transcripts related to nop56

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	nop56-201 (1) Ensembl	Ensembl	836 nt	Select Tool ZFIN BLAST
aberrant processed transcript	nop56-202 (1) Ensembl	Ensembl	1,134 nt	Select Tool ZFIN BLAST
mRNA	nop56-203 (1) Ensembl	Ensembl	2,039 nt	Select Tool ZFIN BLAST
ncRNA	nop56-003 (1) Ensembl	Ensembl	826 nt	Select Tool ZFIN BLAST
ncRNA	nop56-004	Ensembl	794 nt
ncRNA	nop56-005 (1) Ensembl	Ensembl	799 nt	Select Tool ZFIN BLAST
ncRNA	nop56-007 (1) Ensembl	Ensembl	1,014 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations