Transcript

srsf2a-202

ID

ZDB-TSCRIPT-090929-8568

Name

srsf2a-202 Nomenclature History

Previous Names

sfrs2-006
srsf2-006
srsf2a-006

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

srsf2a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000132753 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000132753.2|gene_biotype:protein_coding|ENSDARG00000057484.8 transcript_biotype:nonsense_mediated_decay cdna chromosome:GRCz11:12:31721288:31722993:-1
CCAGGTCCCGCTCAAGGTCCAAGTCCAAATCTCACTCCAG
GAGCCGCACCCCCAGATCGAACAAAGGATCCAAATCCAGG
TCCAGATCAAGAAGCAGACCCAAGTCTCCAGAGGCTACTG
ATGACGCTGCTGTTGAATCGTGAAATCTGCTGATTCCTGT
TTGCAAAAGAGGAGTTTGGGGCAGTTTGAGAGCAGTTAGT
GTGTGATCCGACCATTGGCTGCCTGCTGCTGATTGGCGGT
TGCTATGGAGCAGATGATGACTGGTTGAATCTTCAAGGAT
CGCAGTGAACAGATGTCCGTCTGAGGATACCCAAATTATC
CATATATCAGACCGAAAGGTTATTGTAATTTGGTCTACAT
CTTTTTAAATGATTTTGTTTCTCCTCTTTTGCCCACATTT
TTGTATCAAACACATTTCATGTGATATTAAATGATCTTTA
TGCCTAATTGGGGATATTAGGTGAAATCATTTCTCTTCAT
TTTGGTAGTTTGCTTATTTGTTTTCCCCTTCCCTACTTCA
TGTTATTGAACCTCACAGACTTTAACGTAAGTTCATTTTA
ATTAGTTTTTTTGTTCTTAATA

OTTDART00000025862 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000025862|OTTDARG00000020615|ZDB-GENE-040426-2706 srsf2a|OTTDARP00000045891 sfrs2-006 LG_ CR352342.9 Danio rerio protein_coding KNOWN, 582 bp
CCAGGTCCCGCTCAAGGTCCAAGTCCAAATCTCACTCCAG
GAGCCGCACCCCCAGATCGAACAAAGGATCCAAATCCAGG
TCCAGATCAAGAAGCAGACCCAAGTCTCCAGAGGCTACTG
ATGACGCTGCTGTTGAATCGTGAAATCTGCTGATTCCTGT
TTGCAAAAGAGGAGTTTGGGGCAGTTTGAGAGCAGTTAGT
GTGTGATCCGACCATTGGCTGCCTGCTGCTGATTGGCGGT
TGCTATGGAGCAGATGATGACTGGTTGAATCTTCAAGGAT
CGCAGTGAACAGATGTCCGTCTGAGGATACCCAAATTATC
CATATATCAGACCGAAAGGTTATTGTAATTTGGTCTACAT
CTTTTTAAATGATTTTGTTTCTCCTCTTTTGCCCACATTT
TTGTATCAAACACATTTCATGTGATATTAAATGATCTTTA
TGCCTAATTGGGGATATTAGGTGAAATCATTTCTCTTCAT
TTTGGTAGTTTGCTTATTTGTTTTCCCCTTCCCTACTTCA
TGTTATTGAACCTCACAGACTTTAACGTAAGTTCATTTTA
ATTAGTTTTTTTGTTCTTAATA

Related Transcripts

Transcripts related to srsf2a

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	srsf2a-202	Ensembl	582 nt
aberrant processed transcript	srsf2a-205 (1) Ensembl	Ensembl	567 nt	Select Tool ZFIN BLAST
aberrant processed transcript	srsf2a-206 (1) Ensembl	Ensembl	603 nt	Select Tool ZFIN BLAST
aberrant processed transcript	srsf2a-208 (1) Ensembl	Ensembl	908 nt	Select Tool ZFIN BLAST
mRNA	srsf2a-201 (1) Ensembl	Ensembl	1,776 nt	Select Tool ZFIN BLAST
mRNA	srsf2a-204 (1) Ensembl	Ensembl	1,151 nt	Select Tool ZFIN BLAST
mRNA	srsf2a-207 (1) Ensembl	Ensembl	855 nt	Select Tool ZFIN BLAST
mRNA	srsf2a-209 (1) Ensembl	Ensembl	707 nt	Select Tool ZFIN BLAST
mRNA	srsf2a-211 (1) Ensembl	Ensembl	788 nt	Select Tool ZFIN BLAST
ncRNA	srsf2a-002 (1) Ensembl	Ensembl	1,024 nt	Select Tool ZFIN BLAST
ncRNA	srsf2a-010 (1) Ensembl	Ensembl	636 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations