Transcript

ottdart00000062042

ID

ZDB-TSCRIPT-141209-3596

Name

ottdart00000062042 Nomenclature History

Previous Names

ch73-250p19.1-003

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

hmga1a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000136394 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000136394.2|gene_biotype:protein_coding|ENSDARG00000028335.9 transcript_biotype:retained_intron cdna chromosome:GRCz11:23:3757789:3759436:-1
TTCATTCGCAGCTCGCGGACCTCGCTGGTGTGCACACTTT
GGACTTTGTCCCGACCGCTCCTTTAAAAGGTGTTCCAGTA
AGACACAATGAGTGATTCTGGCAAGGACACAGTGGCGACT
AAAGAGAAAGATGGAGCAGAGAAGAGAGGACGTGGAAGAC
CCCGAAAACACCCACAGGTGCTGTTCTGCTCTCCAGCGCG
GGCTGCTGGTGTTCTCGTATAGCTGAGGCGGTAACCCTGC
CCTTGTTTTGCGTTAAGATTTTTTTAAGTAGATGCCTGTT
GATTTTTTTTTACACATTTGGCAGTCTTGCACCTCAAGTG
TAACCCCGTTTTTTGTGCGATAAGCTGGTTTAAGCGCTCC
GCGCTATCAGTTTACGTCAGGGTCTTTGTTTAGTTGCGTC
TAGCGCTCATTTGCACACGCTTCACATGTGCAGTGGTCAT
CTGTAGTGGCAGGATGACCAAGGCCTGTAACATGATCTCT
TTAAACCAGCAGTAACCCACTTACTGCTTCAGCTGCGCGC
TGATTGGCCGCCGGAGAGTGCCAGCGTCTGATTGGCTCAT
CCCACTGTCAATCACAGGGCCTCGCGAGTGCATTGGGTTT
AAAGTTTCTATTACTCACCCGTGTAATCAGAGCCTTTGAG
TAGTAATCCATGGCCACCATCATACAACAAGACAGTGCTC
GTCCTGTAGCCGTCGTTTATCTTTTTATTTTAACAAAAGA
TGATTTGGTTAAAACAATGAGTAAA

OTTDART00000062042 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000062042|OTTDARG00000042912|ZDB-GENE-010502-1 hmga1a|no_translation CH73-250P19.1-003 LG_ CU861894.12 Danio rerio protein_coding KNOWN, 745 bp
TTCATTCGCAGCTCGCGGACCTCGCTGGTGTGCACACTTT
GGACTTTGTCCCGACCGCTCCTTTAAAAGGTGTTCCAGTA
AGACACAATGAGTGATTCTGGCAAGGACACAGTGGCGACT
AAAGAGAAAGATGGAGCAGAGAAGAGAGGACGTGGAAGAC
CCCGAAAACACCCACAGGTGCTGTTCTGCTCTCCAGCGCG
GGCTGCTGGTGTTCTCGTATAGCTGAGGCGGTAACCCTGC
CCTTGTTTTGCGTTAAGATTTTTTTAAGTAGATGCCTGTT
GATTTTTTTTTACACATTTGGCAGTCTTGCACCTCAAGTG
TAACCCCGTTTTTTGTGCGATAAGCTGGTTTAAGCGCTCC
GCGCTATCAGTTTACGTCAGGGTCTTTGTTTAGTTGCGTC
TAGCGCTCATTTGCACACGCTTCACATGTGCAGTGGTCAT
CTGTAGTGGCAGGATGACCAAGGCCTGTAACATGATCTCT
TTAAACCAGCAGTAACCCACTTACTGCTTCAGCTGCGCGC
TGATTGGCCGCCGGAGAGTGCCAGCGTCTGATTGGCTCAT
CCCACTGTCAATCACAGGGCCTCGCGAGTGCATTGGGTTT
AAAGTTTCTATTACTCACCCGTGTAATCAGAGCCTTTGAG
TAGTAATCCATGGCCACCATCATACAACAAGACAGTGCTC
GTCCTGTAGCCGTCGTTTATCTTTTTATTTTAACAAAAGA
TGATTTGGTTAAAACAATGAGTAAA

Related Transcripts

Transcripts related to hmga1a

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	hmga1a-201 (1) Ensembl	Ensembl	2,593 nt	Select Tool ZFIN BLAST
mRNA	hmga1a-202 (1) Ensembl	Ensembl	733 nt	Select Tool ZFIN BLAST
mRNA	hmga1a-203 (1) Ensembl	Ensembl	814 nt	Select Tool ZFIN BLAST
mRNA	hmga1a-205 (1) Ensembl	Ensembl	782 nt	Select Tool ZFIN BLAST
mRNA	hmga1a-206 (1) Ensembl	Ensembl	964 nt	Select Tool ZFIN BLAST
mRNA	hmga1a-207 (1) Ensembl	Ensembl	405 nt	Select Tool ZFIN BLAST
mRNA	hmga1a-208 (1) Ensembl	Ensembl	2,416 nt	Select Tool ZFIN BLAST
ncRNA	ottdart00000062042	Ensembl	745 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations