ZFIN Publication List

ZFIN ID: ZDB-ATB-120820-1

CITATIONS (43 total)

Antibody Name: Ab3-sox2

Lee, E.J., Kim, M., Park, S., Shim, J.H., Cho, H.J., Park, J.A., Park, K., Lee, D., Kim, J.H., Jeong, H., Matsuzaki, F., Kim, S.Y., Kim, J., Yang, H., Lee, J.S., Kim, J.W. (2025) Restoration of retinal regenerative potential of Müller glia by disrupting intercellular Prox1 transfer. Nature communications. 16:29282928

Gupta, S., Hui, S.P. (2024) Epigenetic Cross-Talk Between Sirt1 and Dnmt1 Promotes Axonal Regeneration After Spinal Cord Injury in Zebrafish. Molecular neurobiology. :

Jukic, A., Lei, Z., Cebul, E.R., Pinter, K., Tadesse, Y., Jarysta, A., David, S., Mosqueda, N., Tarchini, B., Kindt, K. (2024) Presynaptic Nrxn3 is essential for ribbon-synapse maturation in hair cells. Development (Cambridge, England). 151(19):

Campbell, P.D., Lee, I., Thyme, S., Granato, M. (2023) Mitochondrial proteins encoded by the 22q11.2 neurodevelopmental locus regulate neural stem and progenitor cell proliferation. Molecular psychiatry. 28(9):3769-3781

Cigliola, V., Shoffner, A., Lee, N., Ou, J., Gonzalez, T.J., Hoque, J., Becker, C.J., Han, Y., Shen, G., Faw, T.D., Abd-El-Barr, M.M., Varghese, S., Asokan, A., Poss, K.D. (2023) Spinal cord repair is modulated by the neurogenic factor Hb-egf under direction of a regeneration-associated enhancer. Nature communications. 14:48574857

Palsamy, K., Chen, J.Y., Skaggs, K., Qadeer, Y., Connors, M., Cutler, N., Richmond, J., Kommidi, V., Poles, A., Affrunti, D., Powell, C., Goldman, D., Parent, J.M. (2023) Microglial depletion after brain injury prolongs inflammation and impairs brain repair, adult neurogenesis and pro-regenerative signaling. Glia. 71(11):2642-2663

Wang, C., Wang, X., Zheng, H., Yao, J., Xiang, Y., Liu, D. (2023) The ndrg2 Gene Regulates Hair Cell Morphogenesis and Auditory Function during Zebrafish Development. International Journal of Molecular Sciences. 24(12):

Xiao, Y., Hu, M., Lin, Q., Zhang, T., Li, S., Shu, L., Song, X., Xu, X., Meng, W., Li, X., Xu, H., Mo, X. (2023) Dopey2 and Pcdh7 orchestrate the development of embryonic neural stem cells/ progenitors in zebrafish. iScience. 26:106273106273

Dutto, I., Gerhards, J., Herrera, A., Souckova, O., Škopová, V., Smak, J., Junza, A., Yanes, O., Boeckx, C., Burkhalter, M.D., Zikánová, M., Pons, S., Philipp, M., Lüders, J., Stracker, T.H. (2022) Pathway specific effects of ADSL deficiency on neurodevelopment. eLIFE. 11:

Hevia, C.F., Engel-Pizcueta, C., Udina, F., Pujades, C. (2022) The neurogenic fate of the hindbrain boundaries relies on Notch3-dependent asymmetric cell divisions. Cell Reports. 39:110915

Hopfenmüller, V.L., Perner, B., Reuter, H., Bates, T.J.D., Große, A., Englert, C. (2022) The Wilms Tumor Gene wt1a Contributes to Blood-Cerebrospinal Fluid Barrier Function in Zebrafish. Frontiers in cell and developmental biology. 9:809962

Jin, B., Xie, L., Zhan, D., Zhou, L., Feng, Z., He, J., Qin, J., Zhao, C., Luo, L., Li, L. (2022) Nrf2 dictates the neuronal survival and differentiation of embryonic zebrafish harboring compromised alanyl-tRNA synthetase. Development (Cambridge, England). 149(17)

Kouprianov, V.A., Selmek, A.A., Ferguson, J.L., Mo, X., Shive, H.R. (2022) brca2-mutant zebrafish exhibit context- and tissue-dependent alterations in cell phenotypes and response to injury. Scientific Reports. 12:883

Santos-Ledo, A., Pérez-Montes, C., DeOliveira-Mello, L., Arévalo, R., Velasco, A. (2022) Oligodendrocyte origin and development in the zebrafish visual system. The Journal of comparative neurology. 531(4):515-527

Wei, G., Zhang, X., Cai, C., Sheng, J., Xu, M., Wang, C., Gu, Q., Guo, C., Chen, F., Liu, D., Qian, F. (2022) Dual-Specificity Phosphatase 14 Regulates Zebrafish Hair Cell Formation Through Activation of p38 Signaling Pathway. Frontiers in Cellular Neuroscience. 16:840143

Ceriani, R., Whitlock, K.E. (2021) Gonadotropin Releasing Hormone (Gnrh) Triggers Neurogenesis in the Hypothalamus of Adult Zebrafish. International Journal of Molecular Sciences. 22(11):

Fontenas, L., Kucenas, S. (2021) Spinal cord precursors utilize neural crest cell mechanisms to generate hybrid peripheral myelinating glia. eLIFE. 10:

Reddy, B.R., Babu, N.S., Das, T., Bhattacharya, D., Murthy, C.L.N., Kumar, A., Idris, M.M., Chakravarty, S. (2021) Proteome profile of telencephalon associates attenuated neurogenesis with chronic stress induced mood disorder phenotypes in zebrafish model. Pharmacology, biochemistry, and behavior. 204:173170

Santra, P., Amack, J.D. (2021) Loss of vacuolar-type H+-ATPase induces caspase-independent necrosis-like death of hair cells in zebrafish neuromasts. Disease models & mechanisms. 14(7):

Coulter, M.E., Musaev, D., DeGennaro, E.M., Zhang, X., Henke, K., James, K.N., Smith, R.S., Hill, R.S., Partlow, J.N., Muna Al-Saffar, ., Kamumbu, A.S., Hatem, N., Barkovich, A.J., Aziza, J., Chassaing, N., Zaki, M.S., Sultan, T., Burglen, L., Rajab, A., Al-Gazali, L., Mochida, G.H., Harris, M.P., Gleeson, J.G., Walsh, C.A. (2020) Regulation of human cerebral cortical development by EXOC7 and EXOC8, components of the exocyst complex, and roles in neural progenitor cell proliferation and survival. Genetics in medicine : official journal of the American College of Medical Genetics. 22(6):1040-1050

Wong, C.E.D., Hua, K., Monis, S., Norazit, A., Noor, S.M., Ekker, M. (2020) Cellular Localization of gdnf in Adult Zebrafish Brain. Brain sciences. 10(5):

Ye, Z., Su, Z., Xie, S., Liu, Y., Wang, Y., Xu, X., Zheng, Y., Zhao, M., Jiang, L. (2020) Yap-lin28a axis targets let7-Wnt pathway to restore progenitors for initiating regeneration. eLIFE. 9:

Alassaf, M., Daykin, E.C., Mathiaparanam, J., Wolman, M.A. (2019) Pregnancy-associated plasma protein-aa supports hair cell survival by regulating mitochondrial function. eLIFE. 8:

Chia, K., Mazzolini, J., Mione, M., Sieger, D. (2018) Tumor initiating cells induce Cxcr4-mediated infiltration of pro-tumoral macrophages into the brain. eLIFE. 7

Than-Trong, E., Ortica-Gatti, S., Mella, S., Nepal, C., Alunni, A., Bally-Cuif, L. (2018) Neural stem cell quiescence and stemness are molecularly distinct outputs of the Notch3 signaling cascade in the vertebrate adult brain. Development (Cambridge, England). 145(10)

Tse, M.K., Hung, T.S., Chan, C.M., Wong, T., Dorothea, M., Leclerc, C., Moreau, M., Miller, A.L., Webb, S.E. (2018) Identification of Ca²⁺ signaling components in neural stem/progenitor cells during differentiation into neurons and glia in intact and dissociated zebrafish neurospheres.. Science China. Life sciences. 61(11):1352-1368

Hui, S.P., Sheng, D.Z., Sugimoto, K., Gonzalez-Rajal, A., Nakagawa, S., Hesselson, D., Kikuchi, K. (2017) Zebrafish Regulatory T Cells Mediate Organ-Specific Regenerative Programs. Developmental Cell. 43:659-672.e5

Lei, L., Yan, S.Y., Yang, R., Chen, J.Y., Li, Y., Bu, Y., Chang, N., Zhou, Q., Zhu, X., Li, C.Y., Xiong, J.W. (2017) Spliceosomal protein eftud2 mutation leads to p53-dependent apoptosis in zebrafish neural progenitors. Nucleic acids research. 45(6):3422-3436

Quintana, A.M., Yu, H.C., Brebner, A., Pupavac, M., Geiger, E.A., Watson, A., Castro, V.L., Cheung, W., Chen, S.H., Watkins, D., Pastinen, T., Skovby, F., Appel, B., Rosenblatt, D.S., Shaikh, T.H. (2017) Mutations in THAP11 cause an inborn error of cobalamin metabolism and developmental abnormalities. Human molecular genetics. 26(15):2838-2849

Shim, J., Choi, J.H., Park, M.H., Kim, H., Kim, J.H., Kim, S.Y., Hong, D., Kim, S., Lee, J.E., Kim, C.H., Lee, J.S., Bae, Y.K. (2017) Development of zebrafish medulloblastoma-like PNET model by TALEN-mediated somatic gene inactivation. Oncotarget. 8:55280-55297

Solek, C.M., Feng, S., Perin, S., Weinschutz Mendes, H.C., Ekker, M. (2017) Lineage tracing of dlx1a/2a and dlx5a/6a expressing cells in the developing zebrafish brain. Developmental Biology. 427(1):131-147

Hudish, L.I., Galati, D.F., Ravanelli, A.M., Pearson, C.G., Huang, P., Appel, B. (2016) miR-219 regulates neural progenitors by dampening apical Par protein-dependent Hedgehog signaling. Development (Cambridge, England). 143(13):2292-304

Sánchez, M., Ceci, M.L., Gutiérrez, D., Anguita-Salinas, C., Allende, M.L. (2016) Mechanosensory organ regeneration in zebrafish depends on a population of multipotent progenitor cells kept latent by Schwann cells. BMC Biology. 14:27

Welker, A.M., Jaros, B.D., Puduvalli, V.K., Imitola, J., Kaur, B., Beattie, C.E. (2016) Standardized orthotopic xenografts in zebrafish reveal glioma cell line specific characteristics and tumor cell heterogeneity. Disease models & mechanisms. 9(2):199-210

Chen, H., Beasley, A., Hu, Y., Chen, X. (2015) A Zebrafish Model for Studies on Esophageal Epithelial Biology. PLoS One. 10:e0143878

Dirian, L., Galant, S., Coolen, M., Chen, W., Bedu, S., Houart, C., Bally-Cuif, L., Foucher, I. (2014) Spatial Regionalization and Heterochrony in the Formation of Adult Pallial Neural Stem Cells. Developmental Cell. 30(2):123-36

Pavlou, S., Astell, K., Kasioulis, I., Gakovic, M., Baldock, R., van Heyningen, V., and Coutinho, P. (2014) Pleiotropic effects of Sox2 during the development of the zebrafish epithalamus. PLoS One. 9(1):e87546

Sing-Yee, H., Goh, C.W., Jen-Yang, G., Youn-Sing, L., Millie Lam, K.K., Ni, H., Yunhan, H., Woon-Khiong, C., Chong Shu-Chien, A. (2014) Derivation and Long-Term Culture of an Embryonic Stem Cell-Like Line from Zebrafish Blastomeres Under Feeder-Free Condition. Zebrafish. 11(5):407-20

Hudish, L.I., Blasky, A.J., and Appel, B. (2013) miR-219 Regulates Neural Precursor Differentiation by Direct Inhibition of Apical Par Polarity Proteins. Developmental Cell. 27(4):387-398

Kim, S.H., Scott, S.A., Bennett, M.J., Carson, R.P., Fessel, J., Brown, H.A., and Ess, K.C. (2013) Multi-organ Abnormalities and mTORC1 Activation in Zebrafish Model of Multiple Acyl-CoA Dehydrogenase Deficiency. PLoS Genetics. 9(6):e1003563

Yeh, C.W., Kao, S.H., Cheng, Y.C., and Hsu, L.S. (2013) Knockdown of cyclin-dependent kinase 10 (cdk10) Impairs Neural Progenitor Survival via Modulation of raf1a Expression. The Journal of biological chemistry. 288(39):27927-39

Snyder, J.L., Kearns, C.A., and Appel, B. (2012) Fbxw7 regulates Notch to control specification of neural precursors for oligodendrocyte fate. Neural Development. 7(1):15

Additional Citations (1):

ZFIN Staff (2008) Antibody information from supplier. Manually curated data.