Genomic Feature

psi68

ID
ZDB-ALT-220307-9
Name
psi68
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Piotrowski Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 21: 30349942 - 30351511 (GRCz11) (1) Details
Nucleotide change
AACCTACCGCAGAAACCACGCTGTCACCAACATAAAATTAGAGCTCAACAGTTGGTTTAGTGGATCAGTTTAAATTTCAAATTAAATTTCATGTAAAAAAAAAATTACCCAACTTTTTCATTTTTCTCAATCAATTGCTATTGCAGCTTTGTTTAATACAATGACCAAACACAAACTGAAAATAATAGACAAATTTCTCTTTTATTTCATTGTTTTGTTATTGTTTATTAAATGAAGACATATTAAAACGTATTAATTTCATAATTATACATTCAAAAATGCTGGGTTATTTCAATCTGAATTGGGAAAATATGAACAAATTAAAACGTTGTGTTGTATTGGGGCCTATACATTTAAATAAAAAAAATGATCAATTTTGTCCATATTTTATCCAATATTGGCTTAAATTTACTTAAATATATTCATTCATTTTTTTGGCTTAGTCCCTTTATTAATCTGGGGTTGCCACAGTGGAATGAACCGCCAATTTACTTAAATTTGAGGATCTAAATATTTAGATTTGCACTGTACATTCTGATTCCATTCGTTGCATTTTTCATTCTTTCAGTATACCTCATTTCACTTTAATAGCTGGAGATTTAAGATATAACACAGCAAACACTAAAAATTATCAGTTCAGGTAAACTTACCTTTTAAAACTGCTCAAATTTGCCTAATTTCAGGTTTTGTGTTGTTCATAACAATTAAGTTTGGGAGTAATGCATTAAAAGGGAAAGAGACTCAAAGACCCTATTCTAATAAACGGATCAAGGAAATGTCCTGTAATCTTGCTCTGGAAAAACTGGCATACATTATCAAAGGGAACTTTAAAGACGTATAGCATTTGGAATCCATTTCTACAGTTCTGCAACCCAGTGGACCTGACAGCAGAATAGAACTTAAATAAAACACCAAGGTTAGATAGTGAATCACTGTTGATATTGAATGTAAATAATGCTACTCTATATTAATATTCCTTTTTTAAGTTTTTTGTTATTTTTAAGTTTCATATATTGTCCTAGAGTCGTTTTGTTTAATATGATGTTCAGATGTTTAAATGTCTTGTTTTAATGTTGAGGAAAACCCTAATAAAAAAAAAATTGGGAGTAGTAAAAGTAATGTATGAGATGTAAGGTAAAGTCACTCATGAAACTTAAGACATTCCACTGGTATATCTACAAGCCCCCAAGGTGCCACACAACCCCCCAAACAAATGAGGGCTGAGGTGTGACTTTGTCACCCAATCACAGTAAAGAGGGTGTTGCAAAACTTGTATAAATAGCTCAGGTGAGACAGGTGTCAGGTTGTGGTGCACCTGACCAATCCACCTGTGTAAGACAGAGGCAGCAGAGCAGGAGGCATTTTCTCCTTCAACAAAGAGAAACGGGAAGAAAGCATGACATCATTTGTTCCACAGTCTCTTTCACCTCAGTTCCACAGCATGGGGCAGGAGTCCCAAGAGTTCAGCCTGTACGGTGACAACTTCTACAGCGCCCAGCATGTGCCTAGCCCACAACAAACCCTGCCATCCGCTTACGATTTCGGAGAATACGCAGGGCAGACCTCCAAC/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
1570 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
ATCAGTTAGAAGCCGGCTACATTGTAAAACTAATCGGTGGTCATAATTTATAATATCGTAAAACTCAAAATATTTGGCGTTTGTCTTTTACCGCCATTTTAATGTTATTGTTTAGGCTATAATATATTGAATAGCCTATAAGAGAACTGATTCATAATTTTGATCGCAGATTAGGCAAGGTTGGATTTGGTAAAAATGTGTTTTAATAATCTGGCACGATGGTTAAACGTCAGACTTTCACTTAATCGCGCGCGATCAGAAAACGCCTGCAGACTGATTTCGAGACAGCAAGACAATCTCCCGGCGCGTGGAGGTCTGGGTGGTGCGCGCGCTGTTTTACAATGTAAATTGCGACTGAGATACGAATTCACATTATCTCAGTGAAAGGGTTGAGAAGAGAGTCAATGGCCACACGTTTCACCCCCAGCAGCTTCGAGTGATGTTAAAATGTAAACAAATTAACCTAAACCGAAGGCATGATGGTGTGCTTTTAATATGAC
AACCTACCGCAGAAACCACGCTGTCACCAACATAAAATTAGAGCTCAACAGTTGGTTTAGTGGATCAGTTTAAATTTCAAATTAAATTTCATGTAAAAAAAAAATTACCCAACTTTTTCATTTTTCTCAATCAATTGCTATTGCAGCTTTGTTTAATACAATGACCAAACACAAACTGAAAATAATAGACAAATTTCTCTTTTATTTCATTGTTTTGTTATTGTTTATTAAATGAAGACATATTAAAACGTATTAATTTCATAATTATACATTCAAAAATGCTGGGTTATTTCAATCTGAATTGGGAAAATATGAACAAATTAAAACGTTGTGTTGTATTGGGGCCTATACATTTAAATAAAAAAAATGATCAATTTTGTCCATATTTTATCCAATATTGGCTTAAATTTACTTAAATATATTCATTCATTTTTTTGGCTTAGTCCCTTTATTAATCTGGGGTTGCCACAGTGGAATGAACCGCCAATTTACTTAAATTTGAGGATCTAAATATTTAGATTTGCACTGTACATTCTGATTCCATTCGTTGCATTTTTCATTCTTTCAGTATACCTCATTTCACTTTAATAGCTGGAGATTTAAGATATAACACAGCAAACACTAAAAATTATCAGTTCAGGTAAACTTACCTTTTAAAACTGCTCAAATTTGCCTAATTTCAGGTTTTGTGTTGTTCATAACAATTAAGTTTGGGAGTAATGCATTAAAAGGGAAAGAGACTCAAAGACCCTATTCTAATAAACGGATCAAGGAAATGTCCTGTAATCTTGCTCTGGAAAAACTGGCATACATTATCAAAGGGAACTTTAAAGACGTATAGCATTTGGAATCCATTTCTACAGTTCTGCAACCCAGTGGACCTGACAGCAGAATAGAACTTAAATAAAACACCAAGGTTAGATAGTGAATCACTGTTGATATTGAATGTAAATAATGCTACTCTATATTAATATTCCTTTTTTAAGTTTTTTGTTATTTTTAAGTTTCATATATTGTCCTAGAGTCGTTTTGTTTAATATGATGTTCAGATGTTTAAATGTCTTGTTTTAATGTTGAGGAAAACCCTAATAAAAAAAAAATTGGGAGTAGTAAAAGTAATGTATGAGATGTAAGGTAAAGTCACTCATGAAACTTAAGACATTCCACTGGTATATCTACAAGCCCCCAAGGTGCCACACAACCCCCCAAACAAATGAGGGCTGAGGTGTGACTTTGTCACCCAATCACAGTAAAGAGGGTGTTGCAAAACTTGTATAAATAGCTCAGGTGAGACAGGTGTCAGGTTGTGGTGCACCTGACCAATCCACCTGTGTAAGACAGAGGCAGCAGAGCAGGAGGCATTTTCTCCTTCAACAAAGAGAAACGGGAAGAAAGCATGACATCATTTGTTCCACAGTCTCTTTCACCTCAGTTCCACAGCATGGGGCAGGAGTCCCAAGAGTTCAGCCTGTACGGTGACAACTTCTACAGCGCCCAGCATGTGCCTAGCCCACAACAAACCCTGCCATCCGCTTACGATTTCGGAGAATACGCAGGGCAGACCTCCAAC/- CCTTACCTGTGGTTCAACGGGCCAGGACTCAGTCCAGCTCCTTGCCTCACCACAGGGCCTCAGCACTATGGGATGGCGAA  ...
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations
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