Genomic Feature
ot1014
- ID
- ZDB-ALT-260428-47
- Name
- ot1014
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Akimenko Lab
- Current Source
- Other Pages
-
Notes
No data available
- Genome Browsers
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 16: 22247240 - 22248029 (GRCz12tu) (1) Details
- Nucleotide Change
- AACATGGAAGGATTTGTGGGAGGCAATTTTGCTGCGAACCAGTGTAGGAATCTCATTGCCCATCCGTCTACTTTGGCTCCGAGTACAACCTACACATCGAGTGAGGTGCCAGTGTCGGGCATGGGAGAGCCTGTCAAACAATGCAGCCCGTGTTCGGCCGTGCAAAATACCCCAAGTGCTTCTTTGCCCTATGGATATTTTGGCGGCAGCTATTACCCGTGTAGGATGCCCAAGTCCTGCACGCAACCCACCACATATGGAGAAAAATACATGGACACTTCTGTTTCTGGAGAGGAGTTTCCTTCTCGAGCAAAGGAATTTGCTTTCTACCAGGGCTACTCGTCTGGCCCTTACCAGCCTGTACCAAGTTACCTTGACGTGCCAGTTGTACCTGCGCTGAGCGCTCCTTCGGAACCGAGACATGAATCTCTACTGCCTGTGGAAACGTACCAGCCGTGGGCAATCACTAACGGGTGGAGCAGTCCAGTGTACTGCCCGAAAGATCAAACACAGTCAAGTACCTTGTGGAAATCGTCTATCCAAGGTAAAATGCTGCATCTCTGCTTTATTGCCACAAATAAATCGTTCACAAATGCTTAAGCATAAAAAAGTAACCTTTAGGCCCTGAGAAAAACGAGACTATCTAATAGTTATTTGAAACTGATATTTAAAAAAGAATTAACTTGATATTACTAATTCTTAATGTTAAAAGTAGACTGAAAAGGTTTGTGATTCACAGCAGTTCCTACAACATTTCCGCACACTTATTTATGTGTGCTTTATCCGACGT/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 790 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
ttaaatgtaaaattgtatatttccattgcttttatttgtactttaataCATGGTATTATTATTTACGAATCTTACTGAAAATCCGGTAAGAAGACAAGTAATATCCCATTGTGCAATGGAATGCCACTTGGCCTCCTCTTATGAAGCTTATCACTAGAATCTTTACAGCTATTTTTGACTAAATCCCACCACTTTGTTTCAGTTCAATGCATTACGTTTGTCATGCTAGATTGGCGTTATCTCTAGTTTAGACGTTTATCAACCTCTTTGCATGTCACGTGCCTGCTCTCGTCCAATAACAGTTGGATCCTGACGCACGCGGGGCGCATGGGTATCTGTTACTCCACTGATCCACAGCTTCTCTTTCAGTCTTGGGGAATTCTAAAAGAGCTGCTGGGCTCCATGTAGGGCGTGCTATGACAGCGTCTTTACTCCTCCATTCCCGCTGGATTGACCCGGTGATGTTTCTCTATGACAACGGTTTGGATGATATGAGCAAA
AACATGGAAGGATTTGTGGGAGGCAATTTTGCTGCGAACCAGTGTAGGAATCTCATTGCCCATCCGTCTACTTTGGCTCCGAGTACAACCTACACATCGAGTGAGGTGCCAGTGTCGGGCATGGGAGAGCCTGTCAAACAATGCAGCCCGTGTTCGGCCGTGCAAAATACCCCAAGTGCTTCTTTGCCCTATGGATATTTTGGCGGCAGCTATTACCCGTGTAGGATGCCCAAGTCCTGCACGCAACCCACCACATATGGAGAAAAATACATGGACACTTCTGTTTCTGGAGAGGAGTTTCCTTCTCGAGCAAAGGAATTTGCTTTCTACCAGGGCTACTCGTCTGGCCCTTACCAGCCTGTACCAAGTTACCTTGACGTGCCAGTTGTACCTGCGCTGAGCGCTCCTTCGGAACCGAGACATGAATCTCTACTGCCTGTGGAAACGTACCAGCCGTGGGCAATCACTAACGGGTGGAGCAGTCCAGTGTACTGCCCGAAAGATCAAACACAGTCAAGTACCTTGTGGAAATCGTCTATCCAAGGTAAAATGCTGCATCTCTGCTTTATTGCCACAAATAAATCGTTCACAAATGCTTAAGCATAAAAAAGTAACCTTTAGGCCCTGAGAAAAACGAGACTATCTAATAGTTATTTGAAACTGATATTTAAAAAAGAATTAACTTGATATTACTAATTCTTAATGTTAAAAGTAGACTGAAAAGGTTTGTGATTCACAGCAGTTCCTACAACATTTCCGCACACTTATTTATGTGTGCTTTATCCGACGT/- ATGTATTTTCGTTGGTTGCGCTGCCTCGGAGACACACCATTGTGTTATTACATTTTGCGCCCTATTATTTGATACTCTGC ... - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None