ZFIN ID: ZDB-GENE-980526-340

Mapping Details

Gene Name: GATA binding protein 5
Symbol: gata5
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 23 7,452,497 - 7,463,700 GRCz12tu
NCBI Map Viewer 23 7,452,497 - 7,463,700 GRCz12tu
Ensembl 23 7,379,728 - 7,391,028 GRCz11
NCBI Map Viewer 23 7,379,800 - 7,391,000 GRCz11
UCSC 23 - GRCz11
Vega 23 7,445,756 - 7,457,056 GRCv10
Mapped Clones containing gata5
DKEYP-73A2 Chr: 23 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
hu3392 23 7,453,972 GRCz12tu DIRECT Sealy et al., 2025
23 7,381,272 GRCz11 DIRECT Busch-Nentwich et al., 2013
23 7,447,300 GRCz10 DIRECT Busch-Nentwich et al., 2013
23 7,454,837 Zv9 DIRECT Busch-Nentwich et al., 2013
ihb794 23 7,383,224 - 7,383,249 GRCz11 DIRECT Zebrafish Nomenclature Committee
ihb795 23 7,383,247 - 7,383,257 GRCz11 DIRECT Zebrafish Nomenclature Committee
sa17489 23 7,462,901 GRCz12tu DIRECT Sealy et al., 2025
23 7,390,201 GRCz11 DIRECT Busch-Nentwich et al., 2013
23 7,456,229 GRCz10 DIRECT Busch-Nentwich et al., 2013
23 7,463,766 Zv9 DIRECT Busch-Nentwich et al., 2013
sa24255 23 7,453,600 GRCz12tu DIRECT Sealy et al., 2025
23 7,380,900 GRCz11 DIRECT Busch-Nentwich et al., 2013
23 7,446,928 GRCz10 DIRECT Busch-Nentwich et al., 2013
23 7,454,465 Zv9 DIRECT Busch-Nentwich et al., 2013
sa43913 23 7,453,649 GRCz12tu DIRECT Sealy et al., 2025
23 7,380,949 GRCz11 DIRECT Busch-Nentwich et al., 2013
23 7,446,977 GRCz10 DIRECT Busch-Nentwich et al., 2013
23 7,454,514 Zv9 DIRECT Busch-Nentwich et al., 2013
tm236a 23 7,384,728 GRCz11 DIRECT ZFIN Curated Data
wcm8 23 7,383,224 - 7,383,233 GRCz11 DIRECT Sam et al., 2020
wcm9 23 7,383,210 - 7,383,227 GRCz11 DIRECT Sam et al., 2020
wcm10 23 7,383,226 - 7,383,243 GRCz11 DIRECT Sam et al., 2020
wcm11 23 7,383,225 - 7,383,241 GRCz11 DIRECT Sam et al., 2020
hsc115 23 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
hu3392 23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
23 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
ihb794 23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
23 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
ihb795 23 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
s26 23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
23 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
sa17489 23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
23 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
sa24255 23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
23 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
sa43913 23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
23 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
tm236a 23 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
23 GRCz11 OTHER_MAPPING linkagesDirectMem2
23 GRCz11 OTHER_MAPPING linkagesDirectMem1
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
wcm8 23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
23 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
wcm9 23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
23 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
wcm10 23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
23 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
wcm11 23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
23 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
23 155.16 cR gata5 Loeb/NIH/5000/4000 (LN54) Johnson, Stephen L. Data
23 28.7 cM gata5 Heat Shock (HS) Woods, Ian G. Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.

OTHER MAPPING INFORMATION
Chr 23 Reiter et al., 1999 Reiter et al. (1999. Genes and Development 13:2983-2995)report mapping gata5 to linkage  ...
Genomic Feature tm236a is an allele of gata5
Marker Type Chr Distance Publication / Person Comments
z20895 SSLP 23 1.5 cM Reiter et al., 1999 Reiter, et al. (1999. Genes Dev 13:2983-2995.) report mapping fautm236a to LG23 approximately 1.5cM away from z20895.
Genomic Feature sa43913 is an allele of gata5
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