ZFIN ID: ZDB-GENE-040426-2836

Mapping Details

Gene Name:	UPF1 RNA helicase and ATPase
Symbol:	upf1

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	2	59,500,210 - 59,567,002	GRCz12tu
NCBI Map Viewer	2	59,500,210 - 59,567,002	GRCz12tu
Ensembl	2	56,213,694 - 56,235,043	GRCz11
NCBI Map Viewer	2	56,169,420 - 56,235,045	GRCz11
UCSC	2	-	GRCz11
Vega	2	56,089,849 - 56,111,198	GRCv10

Mapped Clones containing upf1
CH211-59P9	Chr: 2 Details
DKEY-251J8	Chr: 2 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	Citations
sa7535	2	59,529,738	GRCz12tu	DIRECT	Sealy et al., 2025
	2	56,198,962	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	2	56,075,117	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	2	56,412,049	Zv9	DIRECT	Busch-Nentwich et al., 2013
sa11856	2	59,554,351	GRCz12tu	DIRECT	Sealy et al., 2025
	2	56,222,001	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	2	56,098,156	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	2	56,435,088	Zv9	DIRECT	Busch-Nentwich et al., 2013
sa39953	2	59,521,766	GRCz12tu	DIRECT	Sealy et al., 2025
	2	56,190,970	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	2	56,067,125	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	2	56,404,057	Zv9	DIRECT	Busch-Nentwich et al., 2013
t20450	2	56,181,791	GRCz11	DIRECT	Lawir et al., 2020
zju130	2	56,180,169 - 56,180,170	GRCz11	DIRECT	Ma et al., 2019
la028839Tg	2	56,384,045 - 56,384,055	Zv9	ZFIN_Zv9
	2		GRCz11	OTHER_MAPPING	ZFIN Curated Data
t20450	2		GRCz11	OTHER_MAPPING	ZFIN Curated Data
ya3319	2		GRCz11	OTHER_MAPPING	ZFIN Curated Data
zju130	2		GRCz11	OTHER_MAPPING	ZFIN Curated Data

GENETIC MAPPING PANELS: No data available

Markers Encoded by upf1
fj48a01 Chr: 2 Details
fi40f07 Chr: 2 Details

Genomic Feature ya3319 is an allele of upf1