ZFIN ID: ZDB-GENE-040718-186

Mapping Details

Gene Name:	SRY-box transcription factor 1a
Symbol:	sox1a

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	9	23,338,658 - 23,340,585	GRCz12tu
NCBI Map Viewer	9	23,338,658 - 23,340,585	GRCz12tu
Ensembl	9	21,722,733 - 21,724,661	GRCz11
NCBI Map Viewer	9	21,722,734 - 21,724,661	GRCz11
UCSC	9	-	GRCz11
Vega	9	21,911,864 - 21,913,792	GRCv10

Mapped Clones containing sox1a
DKEY-58D5	Chr: 9 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
ka701	9	21,723,127 - 21,723,133	GRCz11	DIRECT		Gerber et al., 2019
u5039	9	21,723,436 - 21,723,445	GRCz11	DIRECT		Lekk et al., 2019
ups8	9	21,723,127 - 21,723,137	GRCz11	DIRECT		Lekk et al., 2019
ka701	9		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	9		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
ka705Tg	9		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	9		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
u5039	9		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	9		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
ups8	9		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	9		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers

GENETIC MAPPING PANELS: No data available

Markers Encoded by sox1a
fi38c08 Chr: 9 Details
fj38h03 Chr: 9 Details

Genomic Feature ka705Tg is an allele of sox1a