ZFIN ID: ZDB-GENE-010502-1

Mapping Details

Gene Name:	high mobility group AT-hook 1a
Symbol:	hmga1a

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	23	3,759,087 - 3,767,106	GRCz12tu
NCBI Map Viewer	23	3,759,087 - 3,767,106	GRCz12tu
Ensembl	23	3,751,458 - 3,759,692	GRCz11
NCBI Map Viewer	23	3,751,451 - 3,759,511	GRCz11
UCSC	23	-	GRCz11
UCSC	23	-	GRCz11
UCSC	23	-	GRCz11
Vega	23	3,808,555 - 3,816,789	GRCv10

Mapped Clones containing hmga1a
CH73-250P19	Chr: 23 Details
DKEY-226K3	Chr: 23 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
mnu306	23	3,758,436 - 3,758,443	GRCz11	DIRECT		Bouwman et al., 2025
sa16984	23	3,764,767	GRCz12tu	DIRECT		Sealy et al., 2025
	23	3,757,168	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	23	3,814,265	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	23	3,770,910	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa37600	23	3,763,936	GRCz12tu	DIRECT		Sealy et al., 2025
	23	3,756,336	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	23	3,813,433	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	23	3,770,078	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa16984	23		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	23		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	23		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
sa37600	23		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	23		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	23		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
23	438.0 cR	hmgiy	Goodfellow T51 (T51)	Geisler, Robert	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

Markers Encoded by hmga1a
fb12b06 Chr: 23 Details
fb18f11 Chr: 23 Details
fl77d01 Chr: 23 Details