ZFIN ID: ZDB-GENE-030131-7949

Mapping Details

Gene Name: SPT6 homolog, histone chaperone and transcription elongation factor
Symbol: supt6h
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 21 29,124,224 - 29,153,757 GRCz12tu
NCBI Map Viewer 21 29,124,224 - 29,153,757 GRCz12tu
Ensembl 21 26,028,947 - 26,058,547 GRCz11
NCBI Map Viewer 21 26,029,007 - 26,058,541 GRCz11
UCSC 21 - GRCz11
Vega 21 25,992,252 - 26,021,852 GRCv10
Mapped Clones containing supt6h
DKEYP-6A12 Chr: 21 Details
DKEY-220H13 Chr: 21 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
hi1621Tg 21 26,049,240 - 26,049,241 GRCz11 DIRECT ZFIN Curated Data
hi2505bTg 21 26,029,032 - 26,029,033 GRCz11 DIRECT ZFIN Curated Data
sa16076 21 29,131,477 GRCz12tu DIRECT Sealy et al., 2025
21 26,036,261 GRCz11 DIRECT Busch-Nentwich et al., 2013
21 25,999,566 GRCz10 DIRECT Busch-Nentwich et al., 2013
21 25,429,748 Zv9 DIRECT Busch-Nentwich et al., 2013
sa16191 21 29,131,477 GRCz12tu DIRECT Sealy et al., 2025
21 26,036,261 GRCz11 DIRECT Busch-Nentwich et al., 2013
21 25,999,566 GRCz10 DIRECT Busch-Nentwich et al., 2013
21 25,429,748 Zv9 DIRECT Busch-Nentwich et al., 2013
sa23947 21 29,130,769 GRCz12tu DIRECT Sealy et al., 2025
21 26,035,552 GRCz11 DIRECT Busch-Nentwich et al., 2013
21 25,998,857 GRCz10 DIRECT Busch-Nentwich et al., 2013
21 25,429,039 Zv9 DIRECT Busch-Nentwich et al., 2013
sa37322 21 29,133,267 GRCz12tu DIRECT Sealy et al., 2025
21 26,038,051 GRCz11 DIRECT Busch-Nentwich et al., 2013
21 26,001,356 GRCz10 DIRECT Busch-Nentwich et al., 2013
21 25,431,538 Zv9 DIRECT Busch-Nentwich et al., 2013
sa37323 21 29,144,774 GRCz12tu DIRECT Sealy et al., 2025
21 26,049,558 GRCz11 DIRECT Busch-Nentwich et al., 2013
21 26,012,863 GRCz10 DIRECT Busch-Nentwich et al., 2013
21 25,443,045 Zv9 DIRECT Busch-Nentwich et al., 2013
sbu2 21 26,050,449 GRCz11 DIRECT Kok et al., 2007
la014035Tg 21 25,434,967 - 25,434,977 Zv9 ZFIN_Zv9 BurgessLin
la021916Tg 21 25,422,984 - 25,422,994 Zv9 ZFIN_Zv9 BurgessLin
m313 21 GRCz11 GENERAL_LOAD load data [singleton]
sbu2 21 GRCz11 GENERAL_LOAD load data [singleton]
hi1621Tg 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
hi2505bTg 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
la014035Tg 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
la021916Tg 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
m313 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
21 GRCz11 OTHER_MAPPING linkagesDirectMem1
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
21 GRCz11 OTHER_MAPPING linkagesDirectMem2
sa16076 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sa16191 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sa23947 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sa37322 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa37323 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sbu2 21 GRCz11 OTHER_MAPPING linkagesDirectMem1
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
21 GRCz11 OTHER_MAPPING linkagesDirectMem2
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage

GENETIC MAPPING PANELS: No data available
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
z10567 SSLP 21 Keegan et al., 2002 Keegan et al. (2002, Dev 129:1623-1632) mapped the pan locus using half-tetrad and bulk segregant analysis to a small (< 1 cM) region on linkage group 21 between SSLP markers Z21106 and Z10567.
z21106 SSLP 21 Keegan et al., 2002 Keegan et al. (2002, Dev 129:1623-1632) mapped the pan locus using half-tetrad and bulk segregant analysis to a small (< 1 cM) region on linkage group 21 between SSLP markers Z21106 and Z10567.

OTHER MAPPING INFORMATION
Chr 21 Keegan et al., 2002 Keegan et al. (2002, Dev 129:1623-1632) mapped the pan locus using half-tetrad and bulk  ...
Genomic Feature sbu2 is an allele of supt6h
Marker Type Chr Distance Publication / Person Comments
z10432 SSLP 21 Kok et al., 2007 Kok et al. (2007) show that SBU2 maps to linkage group 21 between Z7809 and  ...
z7809 SSLP 21 Kok et al., 2007 Kok et al. (2007) show that SBU2 maps to linkage group 21 between Z7809 and  ...
Genomic Feature m313 is an allele of supt6h
Marker Type Chr Distance Publication / Person Comments
z10567 SSLP 21 Keegan et al., 2002 Keegan et al. (2002) used half-tetrad analysis and bulk segregant analysis to map the pandora (pan) locus to a <1 cM interval between the SSLP markers z21106 and z10567 on linkage group 21.
z21106 SSLP 21 Keegan et al., 2002 Keegan et al. (2002) used half-tetrad analysis and bulk segregant analysis to map the pandora (pan) locus to a <1 cM interval between the SSLP markers z21106 and z10567 on linkage group 21.
Genomic Feature sbu2 is an allele of supt6h
Chr 21 Kok et al., 2007 Kok et al. (2007) show that SBU2 maps to linkage group 21 between Z7809 and Z10432
Genomic Feature m313 is an allele of supt6h
Chr 21 Keegan et al., 2002 Keegan et al. (2002) used half-tetrad analysis and  ...
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