ZFIN ID: ZDB-GENE-030131-994

ZFIN ID: ZDB-GENE-030131-994

Mapping Details

Gene Name:	RAD21 cohesin complex component a
Symbol:	rad21a

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	16	52,888,260 - 52,905,877	GRCz12tu
NCBI Map Viewer	16	52,888,260 - 52,905,877	GRCz12tu
Ensembl	16	48,409,066 - 48,430,272	GRCz11
NCBI Map Viewer	16	48,409,066 - 48,430,245	GRCz11
UCSC	16	-	GRCz11
Vega	16	48,467,048 - 48,488,254	GRCv10

Mapped Clones containing rad21a
DKEY-210P14	Chr: 16 Details
CH73-179G5	Chr: 16 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
hi2529Tg	16	48,429,968 - 48,429,969	GRCz11	DIRECT		ZFIN Curated Data
nz171	16	48,423,230	GRCz11	DIRECT		Horsfield et al., 2007
sa25032	16	52,892,306	GRCz12tu	DIRECT		Sealy et al., 2025
	16	48,416,020	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	16	48,474,002	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	16	51,613,490	Zv9	DIRECT		Busch-Nentwich et al., 2013
nz171	16		GRCz11	GENERAL_LOAD	load data [singleton]
hi2529Tg	16		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	16		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	16		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
nz171	16		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	16		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	16		GRCz11	OTHER_MAPPING	linkagesDirectMem2
	16		GRCz11	OTHER_MAPPING	linkagesDirectMem1
	16		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
sa25032	16		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	16		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	16		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
16	112.3 cM	rad21	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

Markers Encoded by rad21a
fb93f04 Chr: 16 Details

Genomic Feature nz171 is an allele of rad21a

Marker	Type	Chr	Distance	Publication / Person	Comments
z51029	SSLP	16		Horsfield et al., 2007	Horsfield, et al. (2007. Development 134(14):2639-2649) reports mapping nz171 ...
z25049	SSLP	16		Horsfield et al., 2007	Horsfield, et al. (2007. Development 134(14):2639-2649) reports mapping nz171 ...

Genomic Feature nz171 is an allele of rad21a

Chr 16

Horsfield, et al. (2007. Development 134(14):2639-2649) reports mapping nz171 to LG16, between ...