ZFIN ID: ZDB-GENE-030910-3

Mapping Details

Gene Name: cadherin 17, LI cadherin (liver-intestine)
Symbol: cdh17
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 16 29,897,246 - 29,925,867 GRCz12tu
NCBI Map Viewer 16 29,897,246 - 29,925,867 GRCz12tu
Ensembl 16 26,774,182 - 26,802,798 GRCz11
NCBI Map Viewer 16 26,774,177 - 26,802,798 GRCz11
UCSC 16 - GRCz11
UCSC 16 - GRCz11
Vega 16 26,900,740 - 26,929,356 GRCv10
Mapped Clones containing cdh17
CH211-79L20 Chr: 16 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
sa11932 16 29,919,659 GRCz12tu DIRECT Sealy et al., 2025
16 26,796,590 GRCz11 DIRECT Busch-Nentwich et al., 2013
16 26,923,148 GRCz10 DIRECT Busch-Nentwich et al., 2013
16 29,047,374 Zv9 DIRECT Busch-Nentwich et al., 2013
sa14279 16 29,916,084 GRCz12tu DIRECT Sealy et al., 2025
16 26,793,015 GRCz11 DIRECT Busch-Nentwich et al., 2013
16 26,919,573 GRCz10 DIRECT Busch-Nentwich et al., 2013
16 29,043,799 Zv9 DIRECT Busch-Nentwich et al., 2013
sa32091 16 29,905,449 GRCz12tu DIRECT Sealy et al., 2025
16 26,782,380 GRCz11 DIRECT Busch-Nentwich et al., 2013
16 26,908,938 GRCz10 DIRECT Busch-Nentwich et al., 2013
16 29,033,164 Zv9 DIRECT Busch-Nentwich et al., 2013
sa36153 16 29,907,752 GRCz12tu DIRECT Sealy et al., 2025
16 26,784,683 GRCz11 DIRECT Busch-Nentwich et al., 2013
16 26,911,241 GRCz10 DIRECT Busch-Nentwich et al., 2013
16 29,035,467 Zv9 DIRECT Busch-Nentwich et al., 2013
sa11932 16 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
16 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
16 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa14279 16 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
16 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
16 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa32091 16 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
16 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
16 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa36153 16 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
16 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
16 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers

GENETIC MAPPING PANELS: No data available
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
fb65d02 EST 16 0.0 cM Horsfield et al., 2002 Horsfield et al. (2002., Mechanisms of Development 115:15-26) report that cdh17 corresponds to EST fb65d02.x1. fb65d02.x1 maps to LG16. This EST is a chimeric EST. fb65d02.x1 is 200 kB from the end of ensembl contig ctg26601. The best match for fb65d02.y1 is ensmbl ctg10670.

OTHER MAPPING INFORMATION
Markers Encoded by cdh17
fb65d02 Chr: 16 Details
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