ZFIN ID: ZDB-GENE-040426-2857

Mapping Details

Gene Name:	sorting nexin 5
Symbol:	snx5

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	13	37,091,335 - 37,100,794	GRCz12tu
NCBI Map Viewer	13	37,091,335 - 37,100,794	GRCz12tu
Ensembl	13	33,645,413 - 33,654,931	GRCz11
NCBI Map Viewer	13	33,645,425 - 33,654,884	GRCz11
UCSC	13	-	GRCz11
Vega	13	33,535,868 - 33,545,386	GRCv10

Mapped Clones containing snx5
DKEY-76K16	Chr: 13 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
gyf51	13	33,651,593 - 33,651,600	GRCz11	DIRECT		Zebrafish Nomenclature Committee
sa38956	13	37,096,503	GRCz12tu	DIRECT		Sealy et al., 2025
	13	33,650,593	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	13	33,541,048	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	13	33,875,068	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa45494	13	37,094,111	GRCz12tu	DIRECT		Sealy et al., 2025
	13	33,648,201	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	13	33,538,656	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	13	33,872,676	Zv9	DIRECT		Busch-Nentwich et al., 2013
gyf51	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	13		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
sa38956	13		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa45494	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	13		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
13	362.12 cR	IBD5091	Loeb/NIH/5000/4000 (LN54)	Dawid, Igor B.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

Markers Encoded by snx5
MGC:55769 Chr: 13 Details
fa66c10 Chr: 13 Details